G1544806


Basic Information

Item Value
gene id G1544806
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 37301508 ~ 37302174 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1767721
gaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaactgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggcccgttaaaagtgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctgatacaaggagaagactgatcagagatgcagccaagaggcccatgatcacgctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaaagccatttcttaaagatacccataaaaagtgtcgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1767721 True 667 TUCP 0.44 1 37301508 37302174

Neighbor

gene id symbol gene type direction distance location
prdm1b LOC106588492 coding downstream 211406 37077027 ~ 37090104 (-)
LOC110496124 LOC106588493 coding downstream 244759 36990241 ~ 37056749 (-)
zgc:101785 LOC106588494 coding downstream 311831 36974996 ~ 36989677 (-)
zgc:114119 LOC106588497 coding downstream 361860 36931300 ~ 36939648 (-)
LOC110496120 LOC106588498 coding downstream 466448 36823864 ~ 36835060 (-)
LOC110496131 borea coding upstream 436667 37738841 ~ 37744121 (-)
LOC110496132 LOC106588485 coding upstream 452843 37755017 ~ 37757210 (-)
LOC110496134 LOC106511154 coding upstream 456614 37758788 ~ 37796944 (-)
LOC118941234 NA coding upstream 479195 37781369 ~ 37781447 (-)
LOC110496137 LOC106570035 coding upstream 541862 37844036 ~ 37854732 (-)
G1544799 NA non-coding downstream 3200 37298042 ~ 37298308 (-)
G1544796 NA non-coding downstream 3976 37297223 ~ 37297532 (-)
G1544764 NA non-coding downstream 33954 37267150 ~ 37267554 (-)
G1544758 NA non-coding downstream 37648 37263442 ~ 37263860 (-)
G1544814 NA non-coding upstream 6064 37308238 ~ 37308443 (-)
G1544815 NA non-coding upstream 6375 37308549 ~ 37311042 (-)
G1544828 NA non-coding upstream 21124 37323298 ~ 37323503 (-)
G1544839 NA non-coding upstream 28895 37331069 ~ 37331287 (-)
G1544845 NA non-coding upstream 34016 37336190 ~ 37336454 (-)
G1543346 LOC106588513 other downstream 1288822 36010987 ~ 36012686 (-)
G1543128 LOC106588245 other downstream 1797351 35452618 ~ 35504157 (-)
LOC118941140 NA other downstream 1804526 35492995 ~ 35499681 (-)
LOC110496085 NA other downstream 1951846 35346895 ~ 35351655 (-)
LOC110496081 LOC106588241 other downstream 2121480 35151351 ~ 35203984 (-)
ppt1 LOC106588481 other upstream 619981 37922153 ~ 37930745 (-)
LOC110496154 LOC106588291 other upstream 845416 38121576 ~ 38152320 (-)
G1546053 NA other upstream 863076 38165250 ~ 38214049 (-)
LOC110496167 LOC106588455 other upstream 1257475 38557052 ~ 38563365 (-)
LOC110496175 LOC104924380 other upstream 1372267 38674378 ~ 38676029 (-)

Expression


Co-expression Network