Gene
RNA
| Item | Value |
|---|---|
| gene id | G1545784 |
| gene name | LOC106588469 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 37618838 ~ 37619166 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ephrin type-A receptor 7-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1768784 | False | 329 | lncRNA | 0.63 | 1 | 37618838 | 37619166 |
| TU1768783 | True | 287 | lncRNA | 0.63 | 1 | 37618880 | 37619166 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| prdm1b | LOC106588492 | coding | downstream | 528736 | 37077027 ~ 37090104 (-) |
| LOC110496124 | LOC106588493 | coding | downstream | 562089 | 36990241 ~ 37056749 (-) |
| zgc:101785 | LOC106588494 | coding | downstream | 629161 | 36974996 ~ 36989677 (-) |
| zgc:114119 | LOC106588497 | coding | downstream | 679190 | 36931300 ~ 36939648 (-) |
| LOC110496120 | LOC106588498 | coding | downstream | 783778 | 36823864 ~ 36835060 (-) |
| LOC110496131 | borea | coding | upstream | 119675 | 37738841 ~ 37744121 (-) |
| LOC110496132 | LOC106588485 | coding | upstream | 135851 | 37755017 ~ 37757210 (-) |
| LOC110496134 | LOC106511154 | coding | upstream | 139622 | 37758788 ~ 37796944 (-) |
| LOC118941234 | NA | coding | upstream | 162203 | 37781369 ~ 37781447 (-) |
| LOC110496137 | LOC106570035 | coding | upstream | 224870 | 37844036 ~ 37854732 (-) |
| G1545772 | NA | non-coding | downstream | 45408 | 37573195 ~ 37573430 (-) |
| G1545765 | NA | non-coding | downstream | 62963 | 37551017 ~ 37555875 (-) |
| G1545764 | NA | non-coding | downstream | 64406 | 37548988 ~ 37554432 (-) |
| G1545722 | NA | non-coding | downstream | 139788 | 37478657 ~ 37479050 (-) |
| G1544979 | NA | non-coding | downstream | 175956 | 37442602 ~ 37442882 (-) |
| G1545788 | NA | non-coding | upstream | 7405 | 37626571 ~ 37626873 (-) |
| G1545789 | NA | non-coding | upstream | 10273 | 37629439 ~ 37630277 (-) |
| G1545798 | NA | non-coding | upstream | 47095 | 37666261 ~ 37666479 (-) |
| G1545801 | NA | non-coding | upstream | 51970 | 37671136 ~ 37671354 (-) |
| G1545802 | LOC106588469 | non-coding | upstream | 53195 | 37672361 ~ 37672686 (-) |
| G1544806 | NA | other | downstream | 316664 | 37301508 ~ 37302174 (-) |
| G1543346 | LOC106588513 | other | downstream | 1606152 | 36010987 ~ 36012686 (-) |
| G1543128 | LOC106588245 | other | downstream | 2114681 | 35452618 ~ 35504157 (-) |
| LOC118941140 | NA | other | downstream | 2121856 | 35492995 ~ 35499681 (-) |
| LOC110496085 | NA | other | downstream | 2269176 | 35346895 ~ 35351655 (-) |
| ppt1 | LOC106588481 | other | upstream | 302989 | 37922153 ~ 37930745 (-) |
| LOC110496154 | LOC106588291 | other | upstream | 528424 | 38121576 ~ 38152320 (-) |
| G1546053 | NA | other | upstream | 546084 | 38165250 ~ 38214049 (-) |
| LOC110496167 | LOC106588455 | other | upstream | 940483 | 38557052 ~ 38563365 (-) |
| LOC110496175 | LOC104924380 | other | upstream | 1055275 | 38674378 ~ 38676029 (-) |
