G1545195


Basic Information

Item Value
gene id G1545195
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 37856883 ~ 37857111 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1768134
tgatggtctgttatttatttttgcttatttgagctgttcttgccataatatggacttggtcttctgtataccacccccaccttgtcacaacactactgattggctcaaacacattaagaaagaaatagattccacaaattaacttttaacaaggcaaacctgttaattgaaatgcattccaggtgactacctcatgaagctggttgagagaatgctaagtgtgcaaagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1768134 True 229 lncRNA 0.38 1 37856883 37857111

Neighbor

gene id symbol gene type direction distance location
psb2 psb2 coding upstream 14653 37829777 ~ 37842230 (+)
LOC110496135 LOC106588480 coding upstream 35113 37817731 ~ 37821770 (+)
LOC110496133 LOC106588468 coding upstream 42545 37796449 ~ 37814338 (+)
LOC110496810 LOC106588469 coding upstream 136042 37465791 ~ 37720841 (+)
LOC110496809 LOC106588491 coding upstream 715163 37132589 ~ 37141720 (+)
LOC110496138 LOC106588470 coding downstream 20999 37878110 ~ 37908391 (+)
LOC110496140 LOC106588477 coding downstream 53866 37910977 ~ 37922130 (+)
si:ch1073-513e17.1 LOC106588475 coding downstream 72508 37929619 ~ 37939229 (+)
LOC110496143 LOC100136525 coding downstream 101217 37958328 ~ 37961910 (+)
LOC110496142 LOC106588478 coding downstream 104986 37962097 ~ 37965967 (+)
G1545194 NA non-coding upstream 637 37856024 ~ 37856246 (+)
G1545096 NA non-coding upstream 143780 37712884 ~ 37713103 (+)
G1545091 LOC106597055 non-coding upstream 162580 37693843 ~ 37694303 (+)
G1545090 NA non-coding upstream 180692 37675990 ~ 37676191 (+)
G1545086 NA non-coding upstream 191799 37664454 ~ 37665084 (+)
G1545197 NA non-coding downstream 3976 37861087 ~ 37861287 (+)
G1545203 NA non-coding downstream 19373 37876484 ~ 37876702 (+)
G1545204 NA non-coding downstream 19795 37876906 ~ 37877137 (+)
G1545205 NA non-coding downstream 20536 37877647 ~ 37877887 (+)
G1545229 NA non-coding downstream 167859 38024970 ~ 38025201 (+)
G1544455 NA other upstream 800396 37055983 ~ 37056487 (+)
G1544137 NA other upstream 993700 36862923 ~ 36863183 (+)
G1544007 NA other upstream 1091650 36764294 ~ 36765233 (+)
LOC110496111 LOC106588509 other upstream 1765277 36076661 ~ 36091606 (+)
G1542324 LOC106588514 other upstream 1893178 35961201 ~ 35963705 (+)
LOC110496158 LOC106588463 other downstream 336141 38193174 ~ 38204538 (+)
G1545533 LOC104965079 other downstream 817916 38675027 ~ 38676004 (+)
LOC110496176 LOC106588451 other downstream 833327 38677975 ~ 38696088 (+)
G1546605 LOC106588434 other downstream 1259377 39116488 ~ 39120019 (+)
G1546641 NA other downstream 1276008 39133119 ~ 39146252 (+)

Expression


Co-expression Network