Gene
RNA
| Item | Value |
|---|---|
| gene id | G1545204 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 37876906 ~ 37877137 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1768143 | True | 232 | lncRNA | 0.35 | 1 | 37876906 | 37877137 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| psb2 | psb2 | coding | upstream | 34676 | 37829777 ~ 37842230 (+) |
| LOC110496135 | LOC106588480 | coding | upstream | 55136 | 37817731 ~ 37821770 (+) |
| LOC110496133 | LOC106588468 | coding | upstream | 62568 | 37796449 ~ 37814338 (+) |
| LOC110496810 | LOC106588469 | coding | upstream | 156065 | 37465791 ~ 37720841 (+) |
| LOC110496809 | LOC106588491 | coding | upstream | 735186 | 37132589 ~ 37141720 (+) |
| LOC110496138 | LOC106588470 | coding | downstream | 973 | 37878110 ~ 37908391 (+) |
| LOC110496140 | LOC106588477 | coding | downstream | 33840 | 37910977 ~ 37922130 (+) |
| si:ch1073-513e17.1 | LOC106588475 | coding | downstream | 52482 | 37929619 ~ 37939229 (+) |
| LOC110496143 | LOC100136525 | coding | downstream | 81191 | 37958328 ~ 37961910 (+) |
| LOC110496142 | LOC106588478 | coding | downstream | 84960 | 37962097 ~ 37965967 (+) |
| G1545203 | NA | non-coding | upstream | 204 | 37876484 ~ 37876702 (+) |
| G1545197 | NA | non-coding | upstream | 15619 | 37861087 ~ 37861287 (+) |
| G1545195 | NA | non-coding | upstream | 19795 | 37856883 ~ 37857111 (+) |
| G1545194 | NA | non-coding | upstream | 20660 | 37856024 ~ 37856246 (+) |
| G1545096 | NA | non-coding | upstream | 163803 | 37712884 ~ 37713103 (+) |
| G1545205 | NA | non-coding | downstream | 510 | 37877647 ~ 37877887 (+) |
| G1545229 | NA | non-coding | downstream | 147833 | 38024970 ~ 38025201 (+) |
| G1545149 | NA | non-coding | downstream | 173971 | 38051108 ~ 38053166 (+) |
| LOC110496149 | LOC100136012 | non-coding | downstream | 176166 | 38029173 ~ 38057722 (+) |
| G1545242 | NA | non-coding | downstream | 217825 | 38094962 ~ 38095210 (+) |
| G1544455 | NA | other | upstream | 820419 | 37055983 ~ 37056487 (+) |
| G1544137 | NA | other | upstream | 1013723 | 36862923 ~ 36863183 (+) |
| G1544007 | NA | other | upstream | 1111673 | 36764294 ~ 36765233 (+) |
| LOC110496111 | LOC106588509 | other | upstream | 1785300 | 36076661 ~ 36091606 (+) |
| G1542324 | LOC106588514 | other | upstream | 1913201 | 35961201 ~ 35963705 (+) |
| LOC110496158 | LOC106588463 | other | downstream | 316115 | 38193174 ~ 38204538 (+) |
| G1545533 | LOC104965079 | other | downstream | 797890 | 38675027 ~ 38676004 (+) |
| LOC110496176 | LOC106588451 | other | downstream | 813301 | 38677975 ~ 38696088 (+) |
| G1546605 | LOC106588434 | other | downstream | 1239351 | 39116488 ~ 39120019 (+) |
| G1546641 | NA | other | downstream | 1255982 | 39133119 ~ 39146252 (+) |
