Gene
RNA
| Item | Value |
|---|---|
| gene id | G1545942 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 38027078 ~ 38027304 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| conserved oligomeric Golgi complex subunit 4 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1769003 | True | 227 | lncRNA | 0.41 | 1 | 38027078 | 38027304 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496145 | LOC106588474 | coding | downstream | 34709 | 37978117 ~ 37992369 (-) |
| ppt1 | LOC106588481 | coding | downstream | 96333 | 37922153 ~ 37930745 (-) |
| LOC110496137 | LOC106570035 | coding | downstream | 172346 | 37844036 ~ 37854732 (-) |
| LOC110496134 | LOC106511154 | coding | downstream | 230134 | 37758788 ~ 37796944 (-) |
| LOC110496154 | LOC106588291 | coding | upstream | 94272 | 38121576 ~ 38152320 (-) |
| LOC118941154 | NA | coding | upstream | 113425 | 38140729 ~ 38141362 (-) |
| trnaa-ugc-137 | NA | coding | upstream | 268579 | 38295883 ~ 38295956 (-) |
| LOC118936476 | LOC106588460 | coding | upstream | 461566 | 38488870 ~ 38491346 (-) |
| LOC110496164 | LOC106588460 | coding | upstream | 474815 | 38502119 ~ 38505762 (-) |
| G1545973 | NA | non-coding | downstream | 22026 | 38002950 ~ 38005052 (-) |
| G1545919 | rl11 | non-coding | downstream | 52609 | 37969124 ~ 37974469 (-) |
| G1545914 | LOC106588478 | non-coding | downstream | 61111 | 37959569 ~ 37965967 (-) |
| G1545922 | NA | non-coding | downstream | 63663 | 37959185 ~ 37963415 (-) |
| G1545879 | LOC106588470 | non-coding | downstream | 125419 | 37900808 ~ 37901659 (-) |
| G1545930 | NA | non-coding | upstream | 25145 | 38052449 ~ 38053142 (-) |
| G1545937 | NA | non-coding | upstream | 31758 | 38059062 ~ 38061372 (-) |
| G1545986 | NA | non-coding | upstream | 34623 | 38061927 ~ 38062239 (-) |
| G1545989 | NA | non-coding | upstream | 37280 | 38064584 ~ 38065131 (-) |
| G1545988 | NA | non-coding | upstream | 38198 | 38065502 ~ 38067551 (-) |
| G1544806 | NA | other | downstream | 724904 | 37301508 ~ 37302174 (-) |
| G1543346 | LOC106588513 | other | downstream | 2014392 | 36010987 ~ 36012686 (-) |
| G1543128 | LOC106588245 | other | downstream | 2522921 | 35452618 ~ 35504157 (-) |
| G1546053 | NA | other | upstream | 137946 | 38165250 ~ 38214049 (-) |
| LOC110496167 | LOC106588455 | other | upstream | 532345 | 38557052 ~ 38563365 (-) |
| LOC110496175 | LOC104924380 | other | upstream | 647137 | 38674378 ~ 38676029 (-) |
| G1546385 | LOC106588448 | other | upstream | 740793 | 38768097 ~ 38773684 (-) |
