Gene
RNA
| Item | Value |
|---|---|
| gene id | G1545242 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 38094962 ~ 38095210 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1768182 | True | 249 | lncRNA | 0.34 | 1 | 38094962 | 38095210 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496152 | LOC106588467 | coding | upstream | 7059 | 38064570 ~ 38087903 (+) |
| LOC110496149 | LOC100136012 | coding | upstream | 37240 | 38029173 ~ 38057722 (+) |
| LOC110496147 | LOC106588484 | coding | upstream | 74738 | 38008948 ~ 38020224 (+) |
| pithd1 | pithd1 | coding | upstream | 86180 | 38005691 ~ 38008782 (+) |
| LOC110496146 | LOC106588473 | coding | upstream | 90973 | 37995963 ~ 38003989 (+) |
| LOC110496153 | LOC106588466 | coding | downstream | 3453 | 38098663 ~ 38107458 (+) |
| LOC110496156 | LOC106588465 | coding | downstream | 58635 | 38153845 ~ 38159055 (+) |
| LOC110496157 | LOC106588464 | coding | downstream | 64483 | 38159693 ~ 38189735 (+) |
| LOC110496158 | LOC106588463 | coding | downstream | 97964 | 38193174 ~ 38204538 (+) |
| LOC110496159 | LOC106588461 | coding | downstream | 112433 | 38207643 ~ 38481331 (+) |
| G1545149 | NA | non-coding | upstream | 41796 | 38051108 ~ 38053166 (+) |
| G1545229 | NA | non-coding | upstream | 69761 | 38024970 ~ 38025201 (+) |
| G1545205 | NA | non-coding | upstream | 217075 | 37877647 ~ 37877887 (+) |
| G1545204 | NA | non-coding | upstream | 217825 | 37876906 ~ 37877137 (+) |
| G1545258 | NA | non-coding | downstream | 26383 | 38121593 ~ 38132628 (+) |
| G1545261 | NA | non-coding | downstream | 32969 | 38128179 ~ 38129018 (+) |
| G1545272 | NA | non-coding | downstream | 50295 | 38145505 ~ 38145709 (+) |
| G1545345 | NA | non-coding | downstream | 144268 | 38239478 ~ 38239829 (+) |
| G1545405 | NA | non-coding | downstream | 293445 | 38388655 ~ 38390118 (+) |
| G1544455 | NA | other | upstream | 1038475 | 37055983 ~ 37056487 (+) |
| G1544137 | NA | other | upstream | 1231779 | 36862923 ~ 36863183 (+) |
| G1544007 | NA | other | upstream | 1329729 | 36764294 ~ 36765233 (+) |
| LOC110496111 | LOC106588509 | other | upstream | 2003356 | 36076661 ~ 36091606 (+) |
| G1542324 | LOC106588514 | other | upstream | 2131257 | 35961201 ~ 35963705 (+) |
| G1545533 | LOC104965079 | other | downstream | 579817 | 38675027 ~ 38676004 (+) |
| LOC110496176 | LOC106588451 | other | downstream | 595228 | 38677975 ~ 38696088 (+) |
| G1546605 | LOC106588434 | other | downstream | 1021278 | 39116488 ~ 39120019 (+) |
| G1546641 | NA | other | downstream | 1037909 | 39133119 ~ 39146252 (+) |
