G1545996 (LOC106570014)



Basic Information


Item Value
gene id G1545996
gene name LOC106570014
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 38157165 ~ 38159050 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1769066
TCATGATTGTAGAACAGTGTCTTCATTTTATTAGAAGGGTAACATAATCAAAGTCAATTCCAAGATGGCTCCCTCATCCTCCAGCAACATTCCAAAATGAAGTACTATAGTACAACATTTCCTCTTTTGTTTCCATTGCCAGGATTGGAGAAGCAGGGATTGTGGCCGAGGAGAAGGCGGCGAGGATGGAGGAGAAGACTACGTCGGGGGACTGGCCAGCGTCGACTGCCTTGTGCAGGCCGCGGGCACTGTAGTATTTGACCAGAGGCACAGTCTGCCCGTGGTAGGCCTCCAGTCGTGAGCGCAGCGTCGGCGCATTGTCGTCGCTGCGGCGCATCAGCGGCTCCCCCGTCACCTGacgatggacagagagaggaaacatttAATGGGTGAAAAGGGCAATTTTGGTTTCTTTC

Function


NR:

description
adenylate kinase 2, mitochondrial isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1769066 True 416 lncRNA 0.52 3 38157165 38159050

Neighbor


gene id symbol gene type direction distance location
LOC110496154 LOC106588291 coding downstream 4845 38121576 ~ 38152320 (-)
LOC118941154 NA coding downstream 15803 38140729 ~ 38141362 (-)
LOC110496145 LOC106588474 coding downstream 164796 37978117 ~ 37992369 (-)
ppt1 LOC106588481 coding downstream 226420 37922153 ~ 37930745 (-)
LOC110496137 LOC106570035 coding downstream 302433 37844036 ~ 37854732 (-)
trnaa-ugc-137 NA coding upstream 136833 38295883 ~ 38295956 (-)
LOC118936476 LOC106588460 coding upstream 329820 38488870 ~ 38491346 (-)
LOC110496164 LOC106588460 coding upstream 343069 38502119 ~ 38505762 (-)
LOC110496165 LOC106588460 coding upstream 356965 38516015 ~ 38518074 (-)
LOC118940976 LOC106588460 coding upstream 358853 38517903 ~ 38519789 (-)
G1546047 NA non-coding downstream 11453 38145512 ~ 38145712 (-)
G1546013 NA non-coding downstream 49736 38098706 ~ 38107429 (-)
G1546011 NA non-coding downstream 60834 38095976 ~ 38096331 (-)
G1545988 NA non-coding downstream 89614 38065502 ~ 38067551 (-)
G1546061 LOC106588464 non-coding upstream 29923 38188973 ~ 38192777 (-)
G1546072 NA non-coding upstream 41096 38200146 ~ 38203696 (-)
G1546073 NA non-coding upstream 45132 38204182 ~ 38204511 (-)
G1546186 NA non-coding upstream 189573 38348623 ~ 38349085 (-)
G1546193 NA non-coding upstream 196498 38355548 ~ 38356495 (-)
G1544806 NA other downstream 854991 37301508 ~ 37302174 (-)
G1543346 LOC106588513 other downstream 2144479 36010987 ~ 36012686 (-)
G1543128 LOC106588245 other downstream 2653008 35452618 ~ 35504157 (-)
G1546053 NA other upstream 6200 38165250 ~ 38214049 (-)
LOC110496167 LOC106588455 other upstream 400599 38557052 ~ 38563365 (-)
LOC110496175 LOC104924380 other upstream 515391 38674378 ~ 38676029 (-)
G1546385 LOC106588448 other upstream 609047 38768097 ~ 38773684 (-)
G1546396 LOC106588446 other upstream 617234 38776284 ~ 38787801 (-)

Expression



Co-expression Network