Gene
RNA
| Item | Value |
|---|---|
| gene id | G1546186 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 38348623 ~ 38349085 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: microtubule-actin cross-linking factor 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1769282 | True | 421 | lncRNA | 0.52 | 2 | 38348623 | 38349085 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnaa-ugc-137 | NA | coding | downstream | 52667 | 38295883 ~ 38295956 (-) |
| LOC110496154 | LOC106588291 | coding | downstream | 196303 | 38121576 ~ 38152320 (-) |
| LOC118941154 | NA | coding | downstream | 207261 | 38140729 ~ 38141362 (-) |
| LOC110496145 | LOC106588474 | coding | downstream | 356254 | 37978117 ~ 37992369 (-) |
| ppt1 | LOC106588481 | coding | downstream | 417878 | 37922153 ~ 37930745 (-) |
| LOC118936476 | LOC106588460 | coding | upstream | 139785 | 38488870 ~ 38491346 (-) |
| LOC110496164 | LOC106588460 | coding | upstream | 153034 | 38502119 ~ 38505762 (-) |
| LOC110496165 | LOC106588460 | coding | upstream | 166930 | 38516015 ~ 38518074 (-) |
| LOC118940976 | LOC106588460 | coding | upstream | 168818 | 38517903 ~ 38519789 (-) |
| zn706 | LOC104962755 | coding | upstream | 173523 | 38522603 ~ 38528524 (-) |
| G1546073 | NA | non-coding | downstream | 144112 | 38204182 ~ 38204511 (-) |
| G1546072 | NA | non-coding | downstream | 144927 | 38200146 ~ 38203696 (-) |
| G1546061 | LOC106588464 | non-coding | downstream | 155846 | 38188973 ~ 38192777 (-) |
| G1545996 | LOC106570014 | non-coding | downstream | 189573 | 38157165 ~ 38159050 (-) |
| G1546193 | NA | non-coding | upstream | 6463 | 38355548 ~ 38356495 (-) |
| G1546226 | NA | non-coding | upstream | 85902 | 38434987 ~ 38437752 (-) |
| LOC110496166 | LOC106588455 | non-coding | upstream | 129854 | 38478939 ~ 38553932 (-) |
| G1546244 | NA | non-coding | upstream | 139788 | 38488873 ~ 38502776 (-) |
| G1546250 | NA | non-coding | upstream | 147844 | 38496929 ~ 38511617 (-) |
| G1546053 | NA | other | downstream | 134574 | 38165250 ~ 38214049 (-) |
| G1544806 | NA | other | downstream | 1046449 | 37301508 ~ 37302174 (-) |
| G1543346 | LOC106588513 | other | downstream | 2335937 | 36010987 ~ 36012686 (-) |
| LOC110496167 | LOC106588455 | other | upstream | 210564 | 38557052 ~ 38563365 (-) |
| LOC110496175 | LOC104924380 | other | upstream | 325356 | 38674378 ~ 38676029 (-) |
| G1546385 | LOC106588448 | other | upstream | 419012 | 38768097 ~ 38773684 (-) |
| G1546396 | LOC106588446 | other | upstream | 427199 | 38776284 ~ 38787801 (-) |
| LOC110496208 | LOC106588417 | other | upstream | 1276690 | 39625771 ~ 39641803 (-) |
