G1545405


Basic Information

Item Value
gene id G1545405
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 38388655 ~ 38390118 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1768355
GTTCCAGAACCATAGAGGTGAGGGGCAGGATGATATATATCAGTGTTCCAGAACCATAGAGGTGAGGGGCAGGATGATATATATCAGTGTTCCAGAACCATAGAGGTGAGGGGCAGGATGATATATATCAGTGTTCCAGAACCATAGAGGTGAGGGGCAGGATGATATATATCAGTGTTCCAGAACCATAGAGGTGAGGGGCAGGATGATATATATCAGTGTTCCAGAACCATAGAGGTGAGGGGCAGGATGATATATATCAGTGTTCCAGAACCATAGAGGTGAGGGGCAGGATGATATATATCAGTGTTCCAGAACCATAGAGGTGAGGGGCAGGATGATATATATCAGTGTTCCAGAACCATAGAGGTGAGGGGCAGGATGATATATATCAGTGTTCCAGAACCATAGAGGTGAGGGGCAGGATGATACATATCAGTGTTCCAGAACCATAGAGACGAGGGGCAGGATGATATATATCAGTGTTCCAGAACCATAGAGGTGAGGGGCAGGATGATATATATCAGTGTTCCAGAACCATAGAGGTGAGGGGCAGGATGATACATATCAGTGTTCCAGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1768355 True 582 lncRNA 0.46 2 38388655 38390118

Neighbor

gene id symbol gene type direction distance location
LOC110496158 LOC106588463 coding upstream 184117 38193174 ~ 38204538 (+)
LOC110496157 LOC106588464 coding upstream 198920 38159693 ~ 38189735 (+)
LOC110496156 LOC106588465 coding upstream 229600 38153845 ~ 38159055 (+)
LOC110496153 LOC106588466 coding upstream 281197 38098663 ~ 38107458 (+)
LOC110496152 LOC106588467 coding upstream 300752 38064570 ~ 38087903 (+)
LOC110496162 LOC106588459 coding downstream 92542 38482660 ~ 38496467 (+)
LOC110496168 mag coding downstream 173851 38563969 ~ 38572330 (+)
si:ch211-171h4.3 LOC106588290 coding downstream 203157 38593275 ~ 38597358 (+)
LOC110496171 LOC106588453 coding downstream 227684 38617802 ~ 38631694 (+)
LOC110496172 LOC106588452 coding downstream 242389 38632507 ~ 38645625 (+)
G1545345 NA non-coding upstream 148826 38239478 ~ 38239829 (+)
G1545272 NA non-coding upstream 242946 38145505 ~ 38145709 (+)
G1545258 NA non-coding upstream 256027 38121593 ~ 38132628 (+)
G1545261 NA non-coding upstream 259637 38128179 ~ 38129018 (+)
G1545242 NA non-coding upstream 293445 38094962 ~ 38095210 (+)
G1545419 NA non-coding downstream 45000 38435118 ~ 38437687 (+)
G1545432 NA non-coding downstream 105289 38495407 ~ 38508802 (+)
G1545436 NA non-coding downstream 112671 38502789 ~ 38516932 (+)
G1545276 NA non-coding downstream 132481 38522599 ~ 38523833 (+)
G1545493 NA non-coding downstream 215150 38605268 ~ 38605493 (+)
G1544455 NA other upstream 1332168 37055983 ~ 37056487 (+)
G1544137 NA other upstream 1525472 36862923 ~ 36863183 (+)
G1544007 NA other upstream 1623422 36764294 ~ 36765233 (+)
LOC110496111 LOC106588509 other upstream 2297049 36076661 ~ 36091606 (+)
G1545533 LOC104965079 other downstream 284909 38675027 ~ 38676004 (+)
LOC110496176 LOC106588451 other downstream 300320 38677975 ~ 38696088 (+)
G1546605 LOC106588434 other downstream 726370 39116488 ~ 39120019 (+)
G1546641 NA other downstream 743001 39133119 ~ 39146252 (+)
G1546713 LOC106569985 other downstream 968293 39358411 ~ 39372481 (+)

Expression


Co-expression Network