G1546250


Basic Information

Item Value
gene id G1546250
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 38496929 ~ 38511617 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1769357
GGCCTGTGTGATGTGTAGTAGTTTGATGCATCTtattactttgtttgtttgtcaccCGAAAATTCAGTCTCAGCCAATGATTGTTAATATCCTCCATTCCTTACCTGACCCTTACAGACGCAGATGCCGGATCCGAAgacattcaaacagcactttgagAGCAAGCATCCCAAGTCCCCAATGCCACCAGAGCTGGTTGATGTTGAGGCTTAAAATGATGACACACACAACGGACCTACAGTTGGGaTACACGATTTGAACACTGCGACTGGTATAATGGCGTCAAGGGACATAACACTGAGACCCCTGGACATGGGTGGGGGAATATTTGTGTGACGACCTACAATGGGGGCAGAAGCTCACCAGCACCCCATCTTATATGTCCAACCACCCCTGAACGTCAGACTTTTGAGAGCAAGCATCCCAAGTCCCCAATGCCACCAGAGCTGGTTGATGTTGAGGCTTAAAATGATGACACACACAACGGACCTACAGTTGGGaTACACGATTTGAACACTGCGACTGGTATAATGGCGTCAAGGGACATAACACTGAGACCCCTGGACATGGGTGGGGGAATATTTGTGTGACGACCTACAATGGGGGCAGAAGCTCACCAGCACCCCATCTTATATGTCCAACCACCCCTGAACGTCAGACTCTATTGAAGCAcctccagtggtgtaaagtacttaagtaaaaatactttaaagtactacttaagttgtttttgggggtatctgtac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1769357 True 746 lncRNA 0.47 4 38496929 38511617

Neighbor

gene id symbol gene type direction distance location
LOC118936476 LOC106588460 coding downstream 5583 38488870 ~ 38491346 (-)
trnaa-ugc-137 NA coding downstream 200973 38295883 ~ 38295956 (-)
LOC110496154 LOC106588291 coding downstream 344609 38121576 ~ 38152320 (-)
LOC118941154 NA coding downstream 355567 38140729 ~ 38141362 (-)
LOC110496145 LOC106588474 coding downstream 504560 37978117 ~ 37992369 (-)
LOC110496165 LOC106588460 coding upstream 4398 38516015 ~ 38518074 (-)
LOC118940976 LOC106588460 coding upstream 6286 38517903 ~ 38519789 (-)
zn706 LOC104962755 coding upstream 10991 38522603 ~ 38528524 (-)
LOC110496166 LOC106588455 coding upstream 29449 38478939 ~ 38553932 (-)
LOC110496167 LOC106588455 coding upstream 45435 38557052 ~ 38563365 (-)
G1546226 NA non-coding downstream 59177 38434987 ~ 38437752 (-)
G1546193 NA non-coding downstream 140434 38355548 ~ 38356495 (-)
G1546186 NA non-coding downstream 147844 38348623 ~ 38349085 (-)
G1546073 NA non-coding downstream 292418 38204182 ~ 38204511 (-)
G1546072 NA non-coding downstream 293233 38200146 ~ 38203696 (-)
G1546291 NA non-coding upstream 39780 38551397 ~ 38551644 (-)
G1546303 mag non-coding upstream 52337 38563954 ~ 38570730 (-)
G1546308 NA non-coding upstream 64515 38576132 ~ 38576346 (-)
G1546053 NA other downstream 282880 38165250 ~ 38214049 (-)
ppt1 LOC106588481 other downstream 573595 37922153 ~ 37930745 (-)
G1544806 NA other downstream 1194755 37301508 ~ 37302174 (-)
G1543346 LOC106588513 other downstream 2484243 36010987 ~ 36012686 (-)
LOC110496175 LOC104924380 other upstream 162824 38674378 ~ 38676029 (-)
G1546385 LOC106588448 other upstream 256480 38768097 ~ 38773684 (-)
G1546396 LOC106588446 other upstream 264667 38776284 ~ 38787801 (-)
LOC110496208 LOC106588417 other upstream 1114158 39625771 ~ 39641803 (-)

Expression


Co-expression Network