Gene
RNA
| Item | Value |
|---|---|
| gene id | G1546330 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 38604400 ~ 38604663 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger BED domain-containing protein 5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1769443 | True | 264 | lncRNA | 0.47 | 1 | 38604400 | 38604663 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496167 | LOC106588455 | coding | downstream | 41035 | 38557052 ~ 38563365 (-) |
| LOC110496166 | LOC106588455 | coding | downstream | 50468 | 38478939 ~ 38553932 (-) |
| zn706 | LOC104962755 | coding | downstream | 75892 | 38522603 ~ 38528524 (-) |
| LOC118940976 | LOC106588460 | coding | downstream | 84611 | 38517903 ~ 38519789 (-) |
| LOC110496165 | LOC106588460 | coding | downstream | 86326 | 38516015 ~ 38518074 (-) |
| LOC110496170 | LOC106588454 | coding | upstream | 6790 | 38611453 ~ 38617573 (-) |
| LOC110496173 | LOC106588288 | coding | upstream | 43697 | 38648360 ~ 38665538 (-) |
| LOC110496175 | LOC104924380 | coding | upstream | 69715 | 38674378 ~ 38676029 (-) |
| LOC110496183 | LOC106588442 | coding | upstream | 359424 | 38964087 ~ 38972431 (-) |
| LOC110496188 | LOC106588437 | coding | upstream | 462201 | 39066864 ~ 39081723 (-) |
| G1546316 | NA | non-coding | downstream | 19251 | 38584949 ~ 38585149 (-) |
| G1546313 | NA | non-coding | downstream | 22512 | 38581586 ~ 38581888 (-) |
| G1546312 | NA | non-coding | downstream | 23926 | 38580177 ~ 38580474 (-) |
| G1546308 | NA | non-coding | downstream | 28054 | 38576132 ~ 38576346 (-) |
| G1546303 | mag | non-coding | downstream | 33670 | 38563954 ~ 38570730 (-) |
| G1546331 | NA | non-coding | upstream | 267 | 38604930 ~ 38605195 (-) |
| G1546376 | NA | non-coding | upstream | 85098 | 38689761 ~ 38689983 (-) |
| G1546379 | NA | non-coding | upstream | 86874 | 38691537 ~ 38691777 (-) |
| G1546380 | NA | non-coding | upstream | 90693 | 38695356 ~ 38696026 (-) |
| G1546382 | NA | non-coding | upstream | 92403 | 38697066 ~ 38702063 (-) |
| G1546053 | NA | other | downstream | 390351 | 38165250 ~ 38214049 (-) |
| LOC110496154 | LOC106588291 | other | downstream | 452168 | 38121576 ~ 38152320 (-) |
| ppt1 | LOC106588481 | other | downstream | 681066 | 37922153 ~ 37930745 (-) |
| G1544806 | NA | other | downstream | 1302226 | 37301508 ~ 37302174 (-) |
| G1546385 | LOC106588448 | other | upstream | 163434 | 38768097 ~ 38773684 (-) |
| G1546396 | LOC106588446 | other | upstream | 171621 | 38776284 ~ 38787801 (-) |
| LOC110496208 | LOC106588417 | other | upstream | 1021112 | 39625771 ~ 39641803 (-) |
| LOC110496816 | LOC106588265 | other | upstream | 1038192 | 39642841 ~ 39688750 (-) |
