Gene
RNA
| Item | Value |
|---|---|
| gene id | G1545493 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 38605268 ~ 38605493 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1768451 | True | 226 | lncRNA | 0.43 | 1 | 38605268 | 38605493 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-171h4.3 | LOC106588290 | coding | upstream | 7910 | 38593275 ~ 38597358 (+) |
| LOC110496168 | mag | coding | upstream | 32938 | 38563969 ~ 38572330 (+) |
| LOC110496162 | LOC106588459 | coding | upstream | 108801 | 38482660 ~ 38496467 (+) |
| LOC110496159 | LOC106588461 | coding | upstream | 123937 | 38207643 ~ 38481331 (+) |
| LOC110496158 | LOC106588463 | coding | upstream | 400730 | 38193174 ~ 38204538 (+) |
| LOC110496171 | LOC106588453 | coding | downstream | 12309 | 38617802 ~ 38631694 (+) |
| LOC110496172 | LOC106588452 | coding | downstream | 27014 | 38632507 ~ 38645625 (+) |
| LOC110496176 | LOC106588451 | coding | downstream | 72482 | 38677975 ~ 38696088 (+) |
| cnot3b | LOC106588450 | coding | downstream | 91628 | 38697121 ~ 38713314 (+) |
| LOC110496812 | LOC106588449 | coding | downstream | 110992 | 38716485 ~ 38730617 (+) |
| G1545276 | NA | non-coding | upstream | 81435 | 38522599 ~ 38523833 (+) |
| G1545436 | NA | non-coding | upstream | 88336 | 38502789 ~ 38516932 (+) |
| G1545432 | NA | non-coding | upstream | 96466 | 38495407 ~ 38508802 (+) |
| G1545419 | NA | non-coding | upstream | 167581 | 38435118 ~ 38437687 (+) |
| G1545405 | NA | non-coding | upstream | 215150 | 38388655 ~ 38390118 (+) |
| G1545508 | NA | non-coding | downstream | 77170 | 38682663 ~ 38685107 (+) |
| G1545537 | NA | non-coding | downstream | 81767 | 38687260 ~ 38687551 (+) |
| G1545558 | NA | non-coding | downstream | 147071 | 38752564 ~ 38752793 (+) |
| G1544455 | NA | other | upstream | 1548781 | 37055983 ~ 37056487 (+) |
| G1544137 | NA | other | upstream | 1742085 | 36862923 ~ 36863183 (+) |
| G1544007 | NA | other | upstream | 1840035 | 36764294 ~ 36765233 (+) |
| LOC110496111 | LOC106588509 | other | upstream | 2513662 | 36076661 ~ 36091606 (+) |
| G1545533 | LOC104965079 | other | downstream | 69534 | 38675027 ~ 38676004 (+) |
| G1546605 | LOC106588434 | other | downstream | 510995 | 39116488 ~ 39120019 (+) |
| G1546641 | NA | other | downstream | 527626 | 39133119 ~ 39146252 (+) |
| G1546713 | LOC106569985 | other | downstream | 752918 | 39358411 ~ 39372481 (+) |
