Gene
RNA
| Item | Value |
|---|---|
| gene id | G1545537 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 38687260 ~ 38687551 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1768512 | True | 292 | lncRNA | 0.49 | 1 | 38687260 | 38687551 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496172 | LOC106588452 | coding | upstream | 41635 | 38632507 ~ 38645625 (+) |
| LOC110496171 | LOC106588453 | coding | upstream | 55566 | 38617802 ~ 38631694 (+) |
| si:ch211-171h4.3 | LOC106588290 | coding | upstream | 89902 | 38593275 ~ 38597358 (+) |
| LOC110496168 | mag | coding | upstream | 114930 | 38563969 ~ 38572330 (+) |
| LOC110496162 | LOC106588459 | coding | upstream | 190793 | 38482660 ~ 38496467 (+) |
| cnot3b | LOC106588450 | coding | downstream | 9570 | 38697121 ~ 38713314 (+) |
| LOC110496812 | LOC106588449 | coding | downstream | 28934 | 38716485 ~ 38730617 (+) |
| LOC110496178 | LOC106588448 | coding | downstream | 66514 | 38754065 ~ 38773708 (+) |
| LOC110496179 | LOC106588446 | coding | downstream | 88697 | 38776248 ~ 38787830 (+) |
| LOC110496813 | LOC106570003 | coding | downstream | 129713 | 38817264 ~ 38880268 (+) |
| G1545508 | NA | non-coding | upstream | 2153 | 38682663 ~ 38685107 (+) |
| G1545493 | NA | non-coding | upstream | 81767 | 38605268 ~ 38605493 (+) |
| G1545276 | NA | non-coding | upstream | 163427 | 38522599 ~ 38523833 (+) |
| G1545436 | NA | non-coding | upstream | 170328 | 38502789 ~ 38516932 (+) |
| G1545432 | NA | non-coding | upstream | 178458 | 38495407 ~ 38508802 (+) |
| G1545558 | NA | non-coding | downstream | 65013 | 38752564 ~ 38752793 (+) |
| G1545570 | NA | non-coding | downstream | 106939 | 38794490 ~ 38794949 (+) |
| G1545577 | NA | non-coding | downstream | 112107 | 38799658 ~ 38799909 (+) |
| G1545580 | NA | non-coding | downstream | 115011 | 38802562 ~ 38802847 (+) |
| G1545533 | LOC104965079 | other | upstream | 11256 | 38675027 ~ 38676004 (+) |
| LOC110496158 | LOC106588463 | other | upstream | 482805 | 38193174 ~ 38204538 (+) |
| G1544455 | NA | other | upstream | 1630773 | 37055983 ~ 37056487 (+) |
| G1544137 | NA | other | upstream | 1824077 | 36862923 ~ 36863183 (+) |
| G1544007 | NA | other | upstream | 1922027 | 36764294 ~ 36765233 (+) |
| LOC110496176 | LOC106588451 | other | downstream | 2887 | 38677975 ~ 38696088 (+) |
| G1546605 | LOC106588434 | other | downstream | 428937 | 39116488 ~ 39120019 (+) |
| G1546641 | NA | other | downstream | 445568 | 39133119 ~ 39146252 (+) |
| G1546713 | LOC106569985 | other | downstream | 670860 | 39358411 ~ 39372481 (+) |
| G1546817 | LOC106588418 | other | downstream | 779903 | 39467454 ~ 39469365 (+) |
