Gene
RNA
| Item | Value |
|---|---|
| gene id | G1546376 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 38689761 ~ 38689983 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1769499 | True | 223 | lncRNA | 0.33 | 1 | 38689761 | 38689983 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496175 | LOC104924380 | coding | downstream | 14384 | 38674378 ~ 38676029 (-) |
| LOC110496173 | LOC106588288 | coding | downstream | 24223 | 38648360 ~ 38665538 (-) |
| LOC110496170 | LOC106588454 | coding | downstream | 72188 | 38611453 ~ 38617573 (-) |
| LOC110496167 | LOC106588455 | coding | downstream | 126396 | 38557052 ~ 38563365 (-) |
| LOC110496166 | LOC106588455 | coding | downstream | 135829 | 38478939 ~ 38553932 (-) |
| LOC110496183 | LOC106588442 | coding | upstream | 274104 | 38964087 ~ 38972431 (-) |
| LOC110496188 | LOC106588437 | coding | upstream | 376881 | 39066864 ~ 39081723 (-) |
| LOC110496190 | LOC106588434 | coding | upstream | 426608 | 39116591 ~ 39146595 (-) |
| LOC110496197 | LOC106588427 | coding | upstream | 543138 | 39233121 ~ 39245055 (-) |
| LOC110496198 | LOC106588427 | coding | upstream | 557215 | 39247198 ~ 39262456 (-) |
| G1546331 | NA | non-coding | downstream | 84566 | 38604930 ~ 38605195 (-) |
| G1546330 | NA | non-coding | downstream | 85098 | 38604400 ~ 38604663 (-) |
| G1546316 | NA | non-coding | downstream | 104612 | 38584949 ~ 38585149 (-) |
| G1546313 | NA | non-coding | downstream | 107873 | 38581586 ~ 38581888 (-) |
| G1546312 | NA | non-coding | downstream | 109287 | 38580177 ~ 38580474 (-) |
| G1546379 | NA | non-coding | upstream | 1554 | 38691537 ~ 38691777 (-) |
| G1546380 | NA | non-coding | upstream | 5373 | 38695356 ~ 38696026 (-) |
| G1546382 | NA | non-coding | upstream | 7083 | 38697066 ~ 38702063 (-) |
| G1546402 | LOC106588449 | non-coding | upstream | 36306 | 38726289 ~ 38730601 (-) |
| G1546403 | NA | non-coding | upstream | 41230 | 38731213 ~ 38731508 (-) |
| G1546053 | NA | other | downstream | 475712 | 38165250 ~ 38214049 (-) |
| LOC110496154 | LOC106588291 | other | downstream | 537529 | 38121576 ~ 38152320 (-) |
| ppt1 | LOC106588481 | other | downstream | 766427 | 37922153 ~ 37930745 (-) |
| G1546385 | LOC106588448 | other | upstream | 78114 | 38768097 ~ 38773684 (-) |
| G1546396 | LOC106588446 | other | upstream | 86301 | 38776284 ~ 38787801 (-) |
| LOC110496208 | LOC106588417 | other | upstream | 935792 | 39625771 ~ 39641803 (-) |
| LOC110496816 | LOC106588265 | other | upstream | 952872 | 39642841 ~ 39688750 (-) |
| G1548367 | NA | other | upstream | 1695987 | 40385970 ~ 40391883 (-) |
