Gene
RNA
| Item | Value |
|---|---|
| gene id | G1546403 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 38731213 ~ 38731508 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1769543 | True | 296 | lncRNA | 0.39 | 1 | 38731213 | 38731508 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496175 | LOC104924380 | coding | downstream | 55836 | 38674378 ~ 38676029 (-) |
| LOC110496173 | LOC106588288 | coding | downstream | 65675 | 38648360 ~ 38665538 (-) |
| LOC110496170 | LOC106588454 | coding | downstream | 113640 | 38611453 ~ 38617573 (-) |
| LOC110496167 | LOC106588455 | coding | downstream | 167848 | 38557052 ~ 38563365 (-) |
| LOC110496166 | LOC106588455 | coding | downstream | 177281 | 38478939 ~ 38553932 (-) |
| LOC110496183 | LOC106588442 | coding | upstream | 232579 | 38964087 ~ 38972431 (-) |
| LOC110496188 | LOC106588437 | coding | upstream | 335356 | 39066864 ~ 39081723 (-) |
| LOC110496190 | LOC106588434 | coding | upstream | 385083 | 39116591 ~ 39146595 (-) |
| LOC110496197 | LOC106588427 | coding | upstream | 501613 | 39233121 ~ 39245055 (-) |
| LOC110496198 | LOC106588427 | coding | upstream | 515690 | 39247198 ~ 39262456 (-) |
| G1546402 | LOC106588449 | non-coding | downstream | 612 | 38726289 ~ 38730601 (-) |
| G1546382 | NA | non-coding | downstream | 29150 | 38697066 ~ 38702063 (-) |
| G1546380 | NA | non-coding | downstream | 35187 | 38695356 ~ 38696026 (-) |
| G1546379 | NA | non-coding | downstream | 39436 | 38691537 ~ 38691777 (-) |
| G1546376 | NA | non-coding | downstream | 41230 | 38689761 ~ 38689983 (-) |
| G1546404 | NA | non-coding | upstream | 2639 | 38734147 ~ 38734373 (-) |
| G1546430 | NA | non-coding | upstream | 59772 | 38791280 ~ 38791517 (-) |
| G1546433 | NA | non-coding | upstream | 63026 | 38794534 ~ 38794944 (-) |
| G1546437 | NA | non-coding | upstream | 68540 | 38800048 ~ 38800274 (-) |
| G1546446 | NA | non-coding | upstream | 78573 | 38810081 ~ 38810349 (-) |
| G1546053 | NA | other | downstream | 517164 | 38165250 ~ 38214049 (-) |
| LOC110496154 | LOC106588291 | other | downstream | 578981 | 38121576 ~ 38152320 (-) |
| ppt1 | LOC106588481 | other | downstream | 807879 | 37922153 ~ 37930745 (-) |
| G1546385 | LOC106588448 | other | upstream | 36589 | 38768097 ~ 38773684 (-) |
| G1546396 | LOC106588446 | other | upstream | 44776 | 38776284 ~ 38787801 (-) |
| LOC110496208 | LOC106588417 | other | upstream | 894267 | 39625771 ~ 39641803 (-) |
| LOC110496816 | LOC106588265 | other | upstream | 911347 | 39642841 ~ 39688750 (-) |
| G1548367 | NA | other | upstream | 1654462 | 40385970 ~ 40391883 (-) |
