Gene
RNA
| Item | Value |
|---|---|
| gene id | G1545558 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 38752564 ~ 38752793 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1768538 | True | 230 | lncRNA | 0.44 | 1 | 38752564 | 38752793 |
38,749,600
38,750,000
38,750,400
38,750,800
38,751,200
38,751,600
38,752,000
38,752,400
38,752,800
38,753,200
38,753,600
38,754,000
NC_048582.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496812 | LOC106588449 | coding | upstream | 21947 | 38716485 ~ 38730617 (+) |
| cnot3b | LOC106588450 | coding | upstream | 39250 | 38697121 ~ 38713314 (+) |
| LOC110496176 | LOC106588451 | coding | upstream | 58591 | 38677975 ~ 38696088 (+) |
| LOC110496172 | LOC106588452 | coding | upstream | 106939 | 38632507 ~ 38645625 (+) |
| LOC110496171 | LOC106588453 | coding | upstream | 120870 | 38617802 ~ 38631694 (+) |
| LOC110496178 | LOC106588448 | coding | downstream | 1272 | 38754065 ~ 38773708 (+) |
| LOC110496179 | LOC106588446 | coding | downstream | 23455 | 38776248 ~ 38787830 (+) |
| LOC110496813 | LOC106570003 | coding | downstream | 64471 | 38817264 ~ 38880268 (+) |
| LOC110496814 | LOC106570002 | coding | downstream | 149419 | 38902212 ~ 38935725 (+) |
| LOC110496182 | LOC106588443 | coding | downstream | 194155 | 38946948 ~ 38958286 (+) |
| G1545537 | NA | non-coding | upstream | 65013 | 38687260 ~ 38687551 (+) |
| G1545508 | NA | non-coding | upstream | 67457 | 38682663 ~ 38685107 (+) |
| G1545493 | NA | non-coding | upstream | 147071 | 38605268 ~ 38605493 (+) |
| G1545570 | NA | non-coding | downstream | 41697 | 38794490 ~ 38794949 (+) |
| G1545577 | NA | non-coding | downstream | 46865 | 38799658 ~ 38799909 (+) |
| G1545580 | NA | non-coding | downstream | 49769 | 38802562 ~ 38802847 (+) |
| G1545594 | NA | non-coding | downstream | 71083 | 38823876 ~ 38824083 (+) |
| G1545595 | NA | non-coding | downstream | 71435 | 38824228 ~ 38824456 (+) |
| G1545533 | LOC104965079 | other | upstream | 76560 | 38675027 ~ 38676004 (+) |
| LOC110496158 | LOC106588463 | other | upstream | 548109 | 38193174 ~ 38204538 (+) |
| G1544455 | NA | other | upstream | 1696077 | 37055983 ~ 37056487 (+) |
| G1544137 | NA | other | upstream | 1889381 | 36862923 ~ 36863183 (+) |
| G1546605 | LOC106588434 | other | downstream | 363695 | 39116488 ~ 39120019 (+) |
| G1546641 | NA | other | downstream | 380326 | 39133119 ~ 39146252 (+) |
| G1546713 | LOC106569985 | other | downstream | 605618 | 39358411 ~ 39372481 (+) |
| G1546817 | LOC106588418 | other | downstream | 714661 | 39467454 ~ 39469365 (+) |
| G1547334 | LOC107666349 | other | downstream | 1008420 | 39761213 ~ 39761503 (+) |
