Gene
RNA
| Item | Value |
|---|---|
| gene id | G1545580 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 38802562 ~ 38802847 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1768560 | True | 286 | lncRNA | 0.50 | 1 | 38802562 | 38802847 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496179 | LOC106588446 | coding | upstream | 14732 | 38776248 ~ 38787830 (+) |
| LOC110496178 | LOC106588448 | coding | upstream | 28854 | 38754065 ~ 38773708 (+) |
| LOC110496812 | LOC106588449 | coding | upstream | 71945 | 38716485 ~ 38730617 (+) |
| cnot3b | LOC106588450 | coding | upstream | 89248 | 38697121 ~ 38713314 (+) |
| LOC110496176 | LOC106588451 | coding | upstream | 108589 | 38677975 ~ 38696088 (+) |
| LOC110496813 | LOC106570003 | coding | downstream | 14417 | 38817264 ~ 38880268 (+) |
| LOC110496814 | LOC106570002 | coding | downstream | 99365 | 38902212 ~ 38935725 (+) |
| LOC110496182 | LOC106588443 | coding | downstream | 144101 | 38946948 ~ 38958286 (+) |
| LOC118941155 | LOC106588441 | coding | downstream | 192995 | 38995842 ~ 38999455 (+) |
| si:dkey-14o18.2 | LOC106588441 | coding | downstream | 196662 | 38999509 ~ 39005360 (+) |
| G1545577 | NA | non-coding | upstream | 2653 | 38799658 ~ 38799909 (+) |
| G1545570 | NA | non-coding | upstream | 7613 | 38794490 ~ 38794949 (+) |
| G1545558 | NA | non-coding | upstream | 49769 | 38752564 ~ 38752793 (+) |
| G1545537 | NA | non-coding | upstream | 115011 | 38687260 ~ 38687551 (+) |
| G1545594 | NA | non-coding | downstream | 21029 | 38823876 ~ 38824083 (+) |
| G1545595 | NA | non-coding | downstream | 21381 | 38824228 ~ 38824456 (+) |
| G1545597 | NA | non-coding | downstream | 25624 | 38828471 ~ 38828681 (+) |
| G1545598 | NA | non-coding | downstream | 26385 | 38829232 ~ 38829690 (+) |
| G1545533 | LOC104965079 | other | upstream | 126558 | 38675027 ~ 38676004 (+) |
| LOC110496158 | LOC106588463 | other | upstream | 598107 | 38193174 ~ 38204538 (+) |
| G1544455 | NA | other | upstream | 1746075 | 37055983 ~ 37056487 (+) |
| G1544137 | NA | other | upstream | 1939379 | 36862923 ~ 36863183 (+) |
| G1546605 | LOC106588434 | other | downstream | 313641 | 39116488 ~ 39120019 (+) |
| G1546641 | NA | other | downstream | 330272 | 39133119 ~ 39146252 (+) |
| G1546713 | LOC106569985 | other | downstream | 555564 | 39358411 ~ 39372481 (+) |
| G1546817 | LOC106588418 | other | downstream | 664607 | 39467454 ~ 39469365 (+) |
| G1547334 | LOC107666349 | other | downstream | 958366 | 39761213 ~ 39761503 (+) |
