G1545597


Basic Information

Item Value
gene id G1545597
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 38828471 ~ 38828681 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1768577
CAAATATTGCTTCTTGTTTGTGCTTATTTGGTGTAAAATTGAAAgagaaaaacaaaatgtataaagTAATGATTGCATTTCATCCAGGCAAATACTTTATACAGTTTATCTTAAATAGCCTCCTGAAAGTAGCTCCGTATAACCAACTGCTGTGCTGACTGTGAGGGAATCTTTCTGGTTAAAGCTCAAGGAGTCCTGTATCGGTTCTGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1768577 True 211 lncRNA 0.36 1 38828471 38828681

Neighbor

gene id symbol gene type direction distance location
LOC110496179 LOC106588446 coding upstream 40641 38776248 ~ 38787830 (+)
LOC110496178 LOC106588448 coding upstream 54763 38754065 ~ 38773708 (+)
LOC110496812 LOC106588449 coding upstream 97854 38716485 ~ 38730617 (+)
cnot3b LOC106588450 coding upstream 115157 38697121 ~ 38713314 (+)
LOC110496176 LOC106588451 coding upstream 134498 38677975 ~ 38696088 (+)
LOC110496814 LOC106570002 coding downstream 73531 38902212 ~ 38935725 (+)
LOC110496182 LOC106588443 coding downstream 118267 38946948 ~ 38958286 (+)
LOC118941155 LOC106588441 coding downstream 167161 38995842 ~ 38999455 (+)
si:dkey-14o18.2 LOC106588441 coding downstream 170828 38999509 ~ 39005360 (+)
LOC110496930 LOC106588286 coding downstream 178233 39006914 ~ 39009903 (+)
G1545595 NA non-coding upstream 4015 38824228 ~ 38824456 (+)
G1545594 NA non-coding upstream 4388 38823876 ~ 38824083 (+)
G1545580 NA non-coding upstream 25624 38802562 ~ 38802847 (+)
G1545577 NA non-coding upstream 28562 38799658 ~ 38799909 (+)
G1545570 NA non-coding upstream 33522 38794490 ~ 38794949 (+)
G1545598 NA non-coding downstream 551 38829232 ~ 38829690 (+)
G1545667 NA non-coding downstream 131824 38960505 ~ 38965838 (+)
G1545688 NA non-coding downstream 186208 39014889 ~ 39020160 (+)
G1546672 NA non-coding downstream 403017 39231698 ~ 39232206 (+)
G1545533 LOC104965079 other upstream 152467 38675027 ~ 38676004 (+)
LOC110496158 LOC106588463 other upstream 624016 38193174 ~ 38204538 (+)
G1544455 NA other upstream 1771984 37055983 ~ 37056487 (+)
G1544137 NA other upstream 1965288 36862923 ~ 36863183 (+)
G1546605 LOC106588434 other downstream 287807 39116488 ~ 39120019 (+)
G1546641 NA other downstream 304438 39133119 ~ 39146252 (+)
G1546713 LOC106569985 other downstream 529730 39358411 ~ 39372481 (+)
G1546817 LOC106588418 other downstream 638773 39467454 ~ 39469365 (+)
G1547334 LOC107666349 other downstream 932532 39761213 ~ 39761503 (+)

Expression


Co-expression Network