G1545598


Basic Information

Item Value
gene id G1545598
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 38829232 ~ 38829690 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1768578
caattcattgtggcgtggactctacaaggtgtcgaaagcgttccacagggatgctggcccatgttgacgccaatgcttcccacggttgtgtcaagtttgctggatgtcGTTTTTGGTGGGGGACCATTCTTGTTGcacaggggaaactgttgagcgtgaaaaaacccagcagcgttcttgacacaaaccggtgcgcctggcacctactaccataccccgttcaaaggcacttaaatattttgtcttgctcattcaccctctgaatggcacacacacacaatccatgtctcaattgtctcaaggtttaaaaacccttctttaacctgtctcctccccttcatctacactgattgacgtggatttaacaagtgacgtcaataagggatcatggctttcacctggattcacctggtcagtctatgtcatggaaagagcaggtgtccataatgttttgtacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1768578 True 459 lncRNA 0.47 1 38829232 38829690

Neighbor

gene id symbol gene type direction distance location
LOC110496179 LOC106588446 coding upstream 41402 38776248 ~ 38787830 (+)
LOC110496178 LOC106588448 coding upstream 55524 38754065 ~ 38773708 (+)
LOC110496812 LOC106588449 coding upstream 98615 38716485 ~ 38730617 (+)
cnot3b LOC106588450 coding upstream 115918 38697121 ~ 38713314 (+)
LOC110496176 LOC106588451 coding upstream 135259 38677975 ~ 38696088 (+)
LOC110496814 LOC106570002 coding downstream 72522 38902212 ~ 38935725 (+)
LOC110496182 LOC106588443 coding downstream 117258 38946948 ~ 38958286 (+)
LOC118941155 LOC106588441 coding downstream 166152 38995842 ~ 38999455 (+)
si:dkey-14o18.2 LOC106588441 coding downstream 169819 38999509 ~ 39005360 (+)
LOC110496930 LOC106588286 coding downstream 177224 39006914 ~ 39009903 (+)
G1545597 NA non-coding upstream 551 38828471 ~ 38828681 (+)
G1545595 NA non-coding upstream 4776 38824228 ~ 38824456 (+)
G1545594 NA non-coding upstream 5149 38823876 ~ 38824083 (+)
G1545580 NA non-coding upstream 26385 38802562 ~ 38802847 (+)
G1545577 NA non-coding upstream 29323 38799658 ~ 38799909 (+)
G1545667 NA non-coding downstream 130815 38960505 ~ 38965838 (+)
G1545688 NA non-coding downstream 185199 39014889 ~ 39020160 (+)
G1546672 NA non-coding downstream 402008 39231698 ~ 39232206 (+)
G1546707 NA non-coding downstream 430582 39260272 ~ 39260791 (+)
G1545533 LOC104965079 other upstream 153228 38675027 ~ 38676004 (+)
LOC110496158 LOC106588463 other upstream 624777 38193174 ~ 38204538 (+)
G1544455 NA other upstream 1772745 37055983 ~ 37056487 (+)
G1544137 NA other upstream 1966049 36862923 ~ 36863183 (+)
G1546605 LOC106588434 other downstream 286798 39116488 ~ 39120019 (+)
G1546641 NA other downstream 303429 39133119 ~ 39146252 (+)
G1546713 LOC106569985 other downstream 528721 39358411 ~ 39372481 (+)
G1546817 LOC106588418 other downstream 637764 39467454 ~ 39469365 (+)
G1547334 LOC107666349 other downstream 931523 39761213 ~ 39761503 (+)

Expression


Co-expression Network