Gene
RNA
| Item | Value |
|---|---|
| gene id | G1546516 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 38925113 ~ 38927874 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: voltage-dependent calcium channel gamma-7 subunit-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1769663 | True | 301 | lncRNA | 0.46 | 2 | 38925113 | 38927874 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496175 | LOC104924380 | coding | downstream | 249736 | 38674378 ~ 38676029 (-) |
| LOC110496173 | LOC106588288 | coding | downstream | 259575 | 38648360 ~ 38665538 (-) |
| LOC110496170 | LOC106588454 | coding | downstream | 307540 | 38611453 ~ 38617573 (-) |
| LOC110496167 | LOC106588455 | coding | downstream | 361748 | 38557052 ~ 38563365 (-) |
| LOC110496166 | LOC106588455 | coding | downstream | 371181 | 38478939 ~ 38553932 (-) |
| LOC110496183 | LOC106588442 | coding | upstream | 36213 | 38964087 ~ 38972431 (-) |
| LOC110496188 | LOC106588437 | coding | upstream | 138990 | 39066864 ~ 39081723 (-) |
| LOC110496190 | LOC106588434 | coding | upstream | 188717 | 39116591 ~ 39146595 (-) |
| LOC110496197 | LOC106588427 | coding | upstream | 305247 | 39233121 ~ 39245055 (-) |
| LOC110496198 | LOC106588427 | coding | upstream | 319324 | 39247198 ~ 39262456 (-) |
| G1546451 | NA | non-coding | downstream | 104897 | 38819856 ~ 38820216 (-) |
| G1546446 | NA | non-coding | downstream | 114764 | 38810081 ~ 38810349 (-) |
| G1546437 | NA | non-coding | downstream | 124839 | 38800048 ~ 38800274 (-) |
| G1546433 | NA | non-coding | downstream | 130169 | 38794534 ~ 38794944 (-) |
| G1546430 | NA | non-coding | downstream | 133596 | 38791280 ~ 38791517 (-) |
| G1546480 | NA | non-coding | upstream | 4302 | 38932176 ~ 38935722 (-) |
| G1546577 | NA | non-coding | upstream | 102166 | 39030040 ~ 39039927 (-) |
| G1546550 | LOC106588439 | non-coding | upstream | 122636 | 39050510 ~ 39053620 (-) |
| G1546924 | NA | non-coding | upstream | 189880 | 39117754 ~ 39187626 (-) |
| G1546932 | NA | non-coding | upstream | 303816 | 39231690 ~ 39232195 (-) |
| G1546396 | LOC106588446 | other | downstream | 137312 | 38776284 ~ 38787801 (-) |
| G1546385 | LOC106588448 | other | downstream | 151429 | 38768097 ~ 38773684 (-) |
| G1546053 | NA | other | downstream | 711064 | 38165250 ~ 38214049 (-) |
| LOC110496208 | LOC106588417 | other | upstream | 697901 | 39625771 ~ 39641803 (-) |
| LOC110496816 | LOC106588265 | other | upstream | 714981 | 39642841 ~ 39688750 (-) |
| G1548367 | NA | other | upstream | 1458096 | 40385970 ~ 40391883 (-) |
| G1548517 | NA | other | upstream | 1712301 | 40640175 ~ 40685641 (-) |
| LOC118941164 | LOC106588367 | other | upstream | 1977813 | 40902519 ~ 40908744 (-) |
