G1545688


Basic Information

Item Value
gene id G1545688
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 39014889 ~ 39020160 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1768685
GCAAATAATTAAAAGCagactgaatatccctttgagcatggtgaagttattaattacactttgtatcaatacacccagtcactacaaatatacaggcgtccttcctaactcagttgccagagaggaaggaaactgctcagggatttcactatgaggccaatggtgactttaaaacagttacagagtggctgtgatggaagaaaactgaggatggctcaacagcattgtagttactccacaatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1768685 True 244 lncRNA 0.41 2 39014889 39020160

Neighbor

gene id symbol gene type direction distance location
LOC110496930 LOC106588286 coding upstream 4986 39006914 ~ 39009903 (+)
si:dkey-14o18.2 LOC106588441 coding upstream 9529 38999509 ~ 39005360 (+)
LOC118941155 LOC106588441 coding upstream 15434 38995842 ~ 38999455 (+)
LOC110496182 LOC106588443 coding upstream 56603 38946948 ~ 38958286 (+)
LOC110496814 LOC106570002 coding upstream 80970 38902212 ~ 38935725 (+)
LOC110496187 LOC106588439 coding downstream 9297 39029457 ~ 39053644 (+)
LOC110496185 LOC106588438 coding downstream 33567 39053727 ~ 39065036 (+)
LOC110496189 LOC106588436 coding downstream 64236 39084396 ~ 39112480 (+)
LOC110496191 LOC106588431 coding downstream 160846 39181006 ~ 39187628 (+)
LOC110496193 LOC106588432 coding downstream 175473 39195633 ~ 39203114 (+)
G1545667 NA non-coding upstream 49051 38960505 ~ 38965838 (+)
G1545598 NA non-coding upstream 185199 38829232 ~ 38829690 (+)
G1545597 NA non-coding upstream 186208 38828471 ~ 38828681 (+)
G1545595 NA non-coding upstream 190433 38824228 ~ 38824456 (+)
G1546672 NA non-coding downstream 211538 39231698 ~ 39232206 (+)
G1546707 NA non-coding downstream 240112 39260272 ~ 39260791 (+)
G1546717 LOC106588422 non-coding downstream 270022 39290182 ~ 39290983 (+)
G1546713 LOC106569985 non-coding downstream 338251 39358411 ~ 39372481 (+)
G1546759 NA non-coding downstream 354521 39374681 ~ 39384881 (+)
LOC110496176 LOC106588451 other upstream 323620 38677975 ~ 38696088 (+)
G1545533 LOC104965079 other upstream 338885 38675027 ~ 38676004 (+)
LOC110496158 LOC106588463 other upstream 810434 38193174 ~ 38204538 (+)
G1544455 NA other upstream 1958402 37055983 ~ 37056487 (+)
G1544137 NA other upstream 2151706 36862923 ~ 36863183 (+)
G1546605 LOC106588434 other downstream 96328 39116488 ~ 39120019 (+)
G1546641 NA other downstream 112959 39133119 ~ 39146252 (+)
G1546817 LOC106588418 other downstream 447294 39467454 ~ 39469365 (+)
G1547334 LOC107666349 other downstream 741053 39761213 ~ 39761503 (+)

Expression


Co-expression Network