Gene
RNA
| Item | Value |
|---|---|
| gene id | G1546924 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 39117754 ~ 39187626 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1770135 | True | 230 | lncRNA | 0.46 | 2 | 39117754 | 39187626 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496188 | LOC106588437 | coding | downstream | 36031 | 39066864 ~ 39081723 (-) |
| LOC110496183 | LOC106588442 | coding | downstream | 145323 | 38964087 ~ 38972431 (-) |
| LOC110496175 | LOC104924380 | coding | downstream | 442377 | 38674378 ~ 38676029 (-) |
| LOC110496173 | LOC106588288 | coding | downstream | 452216 | 38648360 ~ 38665538 (-) |
| LOC110496170 | LOC106588454 | coding | downstream | 500181 | 38611453 ~ 38617573 (-) |
| LOC110496197 | LOC106588427 | coding | upstream | 45495 | 39233121 ~ 39245055 (-) |
| LOC110496198 | LOC106588427 | coding | upstream | 59572 | 39247198 ~ 39262456 (-) |
| LOC110496200 | LOC106588422 | coding | upstream | 81958 | 39269584 ~ 39295941 (-) |
| LOC110496203 | LOC106588426 | coding | upstream | 121193 | 39308819 ~ 39327038 (-) |
| LOC110496202 | LOC106569985 | coding | upstream | 170772 | 39358398 ~ 39372505 (-) |
| G1546550 | LOC106588439 | non-coding | downstream | 64134 | 39050510 ~ 39053620 (-) |
| G1546577 | NA | non-coding | downstream | 77827 | 39030040 ~ 39039927 (-) |
| G1546480 | NA | non-coding | downstream | 182032 | 38932176 ~ 38935722 (-) |
| G1546516 | NA | non-coding | downstream | 189880 | 38925113 ~ 38927874 (-) |
| G1546451 | NA | non-coding | downstream | 297538 | 38819856 ~ 38820216 (-) |
| G1546932 | NA | non-coding | upstream | 44064 | 39231690 ~ 39232195 (-) |
| G1546933 | NA | non-coding | upstream | 44933 | 39232559 ~ 39233080 (-) |
| G1547038 | NA | non-coding | upstream | 75295 | 39262921 ~ 39263179 (-) |
| G1547039 | NA | non-coding | upstream | 76247 | 39263873 ~ 39264254 (-) |
| G1546396 | LOC106588446 | other | downstream | 329953 | 38776284 ~ 38787801 (-) |
| G1546385 | LOC106588448 | other | downstream | 344070 | 38768097 ~ 38773684 (-) |
| LOC110496167 | LOC106588455 | other | downstream | 554436 | 38557052 ~ 38563365 (-) |
| G1546053 | NA | other | downstream | 903705 | 38165250 ~ 38214049 (-) |
| LOC110496208 | LOC106588417 | other | upstream | 438149 | 39625771 ~ 39641803 (-) |
| LOC110496816 | LOC106588265 | other | upstream | 455229 | 39642841 ~ 39688750 (-) |
| G1548367 | NA | other | upstream | 1198344 | 40385970 ~ 40391883 (-) |
| G1548517 | NA | other | upstream | 1452549 | 40640175 ~ 40685641 (-) |
| LOC118941164 | LOC106588367 | other | upstream | 1718061 | 40902519 ~ 40908744 (-) |
