G1546933


Basic Information

Item Value
gene id G1546933
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 39232559 ~ 39233080 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1770144
TgagaaattcaaactacagtgcggtctgaaattattgacacccttgataaagatgagcaaaaatgtcacaaatatttgaaatactgagctatattgtatgttaaaaaaaagggaaatattattttatactaatacaattgctcagatgAAGAGATTTTGTTGAACAAttcttttattttattatttaaaggtaggggtcaaaatgaaTGCCTCACGTTcattccagatccttgatatccttcgtctgcgtTTATGGACCGCCCTCTTCAGTTCAAAGGTtaggttttcaatgggtttcaattGCAAAATGGCATCATACTTGGAAAGATGGTTTAATCTGTGGACATTTGAGGCTTGAAGAATGATTGATGGATTGGCCACTGCGGGTGATAATCCAGCATTTGCAGAAAGAGAAAATTAggagtgtacagtaccagtcaaaagtttggacacacctactcatttaagggtttttctatttgaactattttctacattgtagaataataatgaagacagcTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1770144 True 522 lncRNA 0.34 1 39232559 39233080

Neighbor

gene id symbol gene type direction distance location
LOC110496190 LOC106588434 coding downstream 85964 39116591 ~ 39146595 (-)
LOC110496188 LOC106588437 coding downstream 150836 39066864 ~ 39081723 (-)
LOC110496183 LOC106588442 coding downstream 260128 38964087 ~ 38972431 (-)
LOC110496175 LOC104924380 coding downstream 557182 38674378 ~ 38676029 (-)
LOC110496173 LOC106588288 coding downstream 567021 38648360 ~ 38665538 (-)
LOC110496197 LOC106588427 coding upstream 41 39233121 ~ 39245055 (-)
LOC110496198 LOC106588427 coding upstream 14118 39247198 ~ 39262456 (-)
LOC110496200 LOC106588422 coding upstream 36504 39269584 ~ 39295941 (-)
LOC110496203 LOC106588426 coding upstream 75739 39308819 ~ 39327038 (-)
LOC110496202 LOC106569985 coding upstream 125318 39358398 ~ 39372505 (-)
G1546932 NA non-coding downstream 364 39231690 ~ 39232195 (-)
G1546924 NA non-coding downstream 44933 39117754 ~ 39187626 (-)
G1546550 LOC106588439 non-coding downstream 178939 39050510 ~ 39053620 (-)
G1546577 NA non-coding downstream 192632 39030040 ~ 39039927 (-)
G1546480 NA non-coding downstream 296837 38932176 ~ 38935722 (-)
G1547038 NA non-coding upstream 29841 39262921 ~ 39263179 (-)
G1547039 NA non-coding upstream 30793 39263873 ~ 39264254 (-)
G1547041 NA non-coding upstream 35536 39268616 ~ 39268818 (-)
G1547052 NA non-coding upstream 141496 39374576 ~ 39384675 (-)
G1546396 LOC106588446 other downstream 444758 38776284 ~ 38787801 (-)
G1546385 LOC106588448 other downstream 458875 38768097 ~ 38773684 (-)
LOC110496167 LOC106588455 other downstream 669241 38557052 ~ 38563365 (-)
G1546053 NA other downstream 1018510 38165250 ~ 38214049 (-)
LOC110496208 LOC106588417 other upstream 392695 39625771 ~ 39641803 (-)
LOC110496816 LOC106588265 other upstream 409775 39642841 ~ 39688750 (-)
G1548367 NA other upstream 1152890 40385970 ~ 40391883 (-)
G1548517 NA other upstream 1407095 40640175 ~ 40685641 (-)
LOC118941164 LOC106588367 other upstream 1672607 40902519 ~ 40908744 (-)

Expression


Co-expression Network