G1546707


Basic Information

Item Value
gene id G1546707
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 39260272 ~ 39260791 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1769892
GGTTGACACGACATCCGCTCCTCACGAAACCAACACTCGGCTCCTCTGACTTAAAAAACTACAGACAggtatcccttctttcttttccttccaaaacacttgagcataCTTTCCCTGACCaactctctcgccatctctctctcagaacgatcttctCGACCCGAAGCGGTCAAACTTCAAGACGAGTCACTCAACCGGAGACAGCTCTTCTCTGTGTAACAGAGGCTCTCAGCGCTGCCAAAGCTGACtcgctctcctctgttctcatcctcctagatgtACCCTCTGCCTTTGACACTGTGGCCCaccagggctgggcgtctcaggctctttGATTGCATCCTACATGGCAGGCCGCTCCTATCAGGTGGCAACAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1769892 True 377 lncRNA 0.53 2 39260272 39260791

Neighbor

gene id symbol gene type direction distance location
LOC110496196 LOC106588428 coding upstream 30351 39221315 ~ 39229921 (+)
LOC110496194 LOC106588429 coding upstream 42064 39208209 ~ 39218208 (+)
LOC110496193 LOC106588432 coding upstream 57158 39195633 ~ 39203114 (+)
LOC110496191 LOC106588431 coding upstream 72644 39181006 ~ 39187628 (+)
LOC110496189 LOC106588436 coding upstream 147792 39084396 ~ 39112480 (+)
LOC110496201 LOC106588424 coding downstream 66046 39326837 ~ 39357124 (+)
LOC118940977 NA coding downstream 325079 39585870 ~ 39586862 (+)
LOC118941156 ssl-2 coding downstream 358928 39619719 ~ 39622185 (+)
LOC110496217 LOC106569969 coding downstream 804469 40065260 ~ 40077268 (+)
kifc1 LOC106588407 coding downstream 835037 40095828 ~ 40101459 (+)
G1546672 NA non-coding upstream 28066 39231698 ~ 39232206 (+)
G1545688 NA non-coding upstream 240112 39014889 ~ 39020160 (+)
G1545667 NA non-coding upstream 294434 38960505 ~ 38965838 (+)
LOC110496814 LOC106570002 non-coding upstream 324547 38902212 ~ 38935725 (+)
G1545598 NA non-coding upstream 430582 38829232 ~ 38829690 (+)
G1546717 LOC106588422 non-coding downstream 29391 39290182 ~ 39290983 (+)
G1546713 LOC106569985 non-coding downstream 97620 39358411 ~ 39372481 (+)
G1546759 NA non-coding downstream 113890 39374681 ~ 39384881 (+)
G1546769 NA non-coding downstream 125680 39386471 ~ 39386732 (+)
G1546770 NA non-coding downstream 126078 39386869 ~ 39387101 (+)
G1546641 NA other upstream 114020 39133119 ~ 39146252 (+)
G1546605 LOC106588434 other upstream 140253 39116488 ~ 39120019 (+)
LOC110496176 LOC106588451 other upstream 569003 38677975 ~ 38696088 (+)
G1545533 LOC104965079 other upstream 584268 38675027 ~ 38676004 (+)
LOC110496158 LOC106588463 other upstream 1055817 38193174 ~ 38204538 (+)
G1546817 LOC106588418 other downstream 206663 39467454 ~ 39469365 (+)
G1547334 LOC107666349 other downstream 500422 39761213 ~ 39761503 (+)
G1547652 LOC106588410 other downstream 774726 40035517 ~ 40040594 (+)
LOC110496221 LOC106588406 other downstream 845204 40103731 ~ 40110006 (+)

Expression


Co-expression Network