G1547038



Basic Information


Item Value
gene id G1547038
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 39262921 ~ 39263179 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1770254
acatcaccaggcggtataaGTTAACAGACCAACAAAGACTTTGCCCACCTGCCAATAATAGCTATACATCAGATTACATGTCCCTCCCATTAGGCTCCAATTaaacacaagaatggagctatatacagggagtaccagtaccagatccaTGTGCAGAGaggtacgaggtatttgaggtagatatgtacatgaagtcagggtaaagtgactaggcatcaggatagataataatacaaGTAAAATAAAAACAGCAAATGAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1770254 True 259 lncRNA 0.40 1 39262921 39263179

Neighbor


gene id symbol gene type direction distance location
LOC110496198 LOC106588427 coding downstream 465 39247198 ~ 39262456 (-)
LOC110496197 LOC106588427 coding downstream 17866 39233121 ~ 39245055 (-)
LOC110496190 LOC106588434 coding downstream 116326 39116591 ~ 39146595 (-)
LOC110496188 LOC106588437 coding downstream 181198 39066864 ~ 39081723 (-)
LOC110496183 LOC106588442 coding downstream 290490 38964087 ~ 38972431 (-)
LOC110496200 LOC106588422 coding upstream 6405 39269584 ~ 39295941 (-)
LOC110496203 LOC106588426 coding upstream 45640 39308819 ~ 39327038 (-)
LOC110496202 LOC106569985 coding upstream 95219 39358398 ~ 39372505 (-)
LOC110496204 LOC106588420 coding upstream 113264 39376443 ~ 39383490 (-)
LOC110496205 LOC100136448 coding upstream 126036 39389215 ~ 39413466 (-)
G1546933 NA non-coding downstream 29841 39232559 ~ 39233080 (-)
G1546932 NA non-coding downstream 30726 39231690 ~ 39232195 (-)
G1546924 NA non-coding downstream 75295 39117754 ~ 39187626 (-)
G1546550 LOC106588439 non-coding downstream 209301 39050510 ~ 39053620 (-)
G1547039 NA non-coding upstream 694 39263873 ~ 39264254 (-)
G1547041 NA non-coding upstream 5437 39268616 ~ 39268818 (-)
G1547052 NA non-coding upstream 111397 39374576 ~ 39384675 (-)
G1547103 NA non-coding upstream 150746 39413925 ~ 39414131 (-)
G1547104 NA non-coding upstream 150994 39414173 ~ 39414433 (-)
G1546396 LOC106588446 other downstream 475120 38776284 ~ 38787801 (-)
G1546385 LOC106588448 other downstream 489237 38768097 ~ 38773684 (-)
LOC110496175 LOC104924380 other downstream 586892 38674378 ~ 38676029 (-)
LOC110496167 LOC106588455 other downstream 699603 38557052 ~ 38563365 (-)
G1546053 NA other downstream 1048872 38165250 ~ 38214049 (-)
LOC110496208 LOC106588417 other upstream 362596 39625771 ~ 39641803 (-)
LOC110496816 LOC106588265 other upstream 379676 39642841 ~ 39688750 (-)
G1548367 NA other upstream 1122791 40385970 ~ 40391883 (-)
G1548517 NA other upstream 1376996 40640175 ~ 40685641 (-)
LOC118941164 LOC106588367 other upstream 1642508 40902519 ~ 40908744 (-)

Expression



Co-expression Network