Gene
RNA
| Item | Value |
|---|---|
| gene id | G1546713 |
| gene name | LOC106569985 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 39358411 ~ 39372481 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| triosephosphate isomerase A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1769900 | False | 1009 | lncRNA | 0.51 | 4 | 39358411 | 39362230 |
| TU1769903 | False | 1332 | TUCP | 0.52 | 7 | 39358411 | 39372481 |
| TU1769902 | True | 400 | lncRNA | 0.41 | 2 | 39372060 | 39372481 |
39,348,000
39,350,000
39,352,000
39,354,000
39,356,000
39,358,000
39,360,000
39,362,000
39,364,000
39,364,000
39,366,000
39,368,000
39,370,000
39,372,000
39,374,000
39,376,000
39,378,000
39,380,000
NC_048582.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496201 | LOC106588424 | coding | upstream | 1287 | 39326837 ~ 39357124 (+) |
| LOC110496196 | LOC106588428 | coding | upstream | 128490 | 39221315 ~ 39229921 (+) |
| LOC110496194 | LOC106588429 | coding | upstream | 140203 | 39208209 ~ 39218208 (+) |
| LOC110496193 | LOC106588432 | coding | upstream | 155297 | 39195633 ~ 39203114 (+) |
| LOC110496191 | LOC106588431 | coding | upstream | 170783 | 39181006 ~ 39187628 (+) |
| LOC118940977 | NA | coding | downstream | 213389 | 39585870 ~ 39586862 (+) |
| LOC118941156 | ssl-2 | coding | downstream | 247238 | 39619719 ~ 39622185 (+) |
| LOC110496217 | LOC106569969 | coding | downstream | 692779 | 40065260 ~ 40077268 (+) |
| kifc1 | LOC106588407 | coding | downstream | 723347 | 40095828 ~ 40101459 (+) |
| LOC110496221 | LOC106588406 | coding | downstream | 731250 | 40103731 ~ 40110006 (+) |
| G1546717 | LOC106588422 | non-coding | upstream | 67428 | 39290182 ~ 39290983 (+) |
| G1546707 | NA | non-coding | upstream | 97620 | 39260272 ~ 39260791 (+) |
| G1546672 | NA | non-coding | upstream | 126205 | 39231698 ~ 39232206 (+) |
| G1545688 | NA | non-coding | upstream | 338251 | 39014889 ~ 39020160 (+) |
| G1545667 | NA | non-coding | upstream | 392573 | 38960505 ~ 38965838 (+) |
| G1546759 | NA | non-coding | downstream | 2200 | 39374681 ~ 39384881 (+) |
| G1546769 | NA | non-coding | downstream | 13990 | 39386471 ~ 39386732 (+) |
| G1546770 | NA | non-coding | downstream | 14388 | 39386869 ~ 39387101 (+) |
| G1546772 | NA | non-coding | downstream | 16208 | 39388689 ~ 39389005 (+) |
| G1546774 | LOC100136448 | non-coding | downstream | 16859 | 39389340 ~ 39409153 (+) |
| G1546641 | NA | other | upstream | 212159 | 39133119 ~ 39146252 (+) |
| G1546605 | LOC106588434 | other | upstream | 238392 | 39116488 ~ 39120019 (+) |
| LOC110496176 | LOC106588451 | other | upstream | 667142 | 38677975 ~ 38696088 (+) |
| G1545533 | LOC104965079 | other | upstream | 682407 | 38675027 ~ 38676004 (+) |
| LOC110496158 | LOC106588463 | other | upstream | 1153956 | 38193174 ~ 38204538 (+) |
| G1546817 | LOC106588418 | other | downstream | 94973 | 39467454 ~ 39469365 (+) |
| G1547334 | LOC107666349 | other | downstream | 388732 | 39761213 ~ 39761503 (+) |
| G1547652 | LOC106588410 | other | downstream | 663036 | 40035517 ~ 40040594 (+) |
| G1547743 | NA | other | downstream | 829428 | 40201909 ~ 40202458 (+) |
