Gene
RNA
| Item | Value |
|---|---|
| gene id | G1546769 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 39386471 ~ 39386732 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1769960 | True | 262 | lncRNA | 0.45 | 1 | 39386471 | 39386732 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496201 | LOC106588424 | coding | upstream | 29347 | 39326837 ~ 39357124 (+) |
| LOC110496196 | LOC106588428 | coding | upstream | 156550 | 39221315 ~ 39229921 (+) |
| LOC110496194 | LOC106588429 | coding | upstream | 168263 | 39208209 ~ 39218208 (+) |
| LOC110496193 | LOC106588432 | coding | upstream | 183357 | 39195633 ~ 39203114 (+) |
| LOC110496191 | LOC106588431 | coding | upstream | 198843 | 39181006 ~ 39187628 (+) |
| LOC118940977 | NA | coding | downstream | 199138 | 39585870 ~ 39586862 (+) |
| LOC118941156 | ssl-2 | coding | downstream | 232987 | 39619719 ~ 39622185 (+) |
| LOC110496217 | LOC106569969 | coding | downstream | 678528 | 40065260 ~ 40077268 (+) |
| kifc1 | LOC106588407 | coding | downstream | 709096 | 40095828 ~ 40101459 (+) |
| LOC110496221 | LOC106588406 | coding | downstream | 716999 | 40103731 ~ 40110006 (+) |
| G1546759 | NA | non-coding | upstream | 1590 | 39374681 ~ 39384881 (+) |
| G1546713 | LOC106569985 | non-coding | upstream | 13990 | 39358411 ~ 39372481 (+) |
| G1546717 | LOC106588422 | non-coding | upstream | 95488 | 39290182 ~ 39290983 (+) |
| G1546707 | NA | non-coding | upstream | 125680 | 39260272 ~ 39260791 (+) |
| G1546672 | NA | non-coding | upstream | 154265 | 39231698 ~ 39232206 (+) |
| G1546770 | NA | non-coding | downstream | 137 | 39386869 ~ 39387101 (+) |
| G1546772 | NA | non-coding | downstream | 1957 | 39388689 ~ 39389005 (+) |
| G1546774 | LOC100136448 | non-coding | downstream | 2608 | 39389340 ~ 39409153 (+) |
| G1546793 | NA | non-coding | downstream | 47085 | 39433817 ~ 39437022 (+) |
| G1546808 | NA | non-coding | downstream | 67007 | 39453739 ~ 39454003 (+) |
| G1546641 | NA | other | upstream | 240219 | 39133119 ~ 39146252 (+) |
| G1546605 | LOC106588434 | other | upstream | 266452 | 39116488 ~ 39120019 (+) |
| LOC110496176 | LOC106588451 | other | upstream | 695202 | 38677975 ~ 38696088 (+) |
| G1545533 | LOC104965079 | other | upstream | 710467 | 38675027 ~ 38676004 (+) |
| G1546817 | LOC106588418 | other | downstream | 80722 | 39467454 ~ 39469365 (+) |
| G1547334 | LOC107666349 | other | downstream | 374481 | 39761213 ~ 39761503 (+) |
| G1547652 | LOC106588410 | other | downstream | 648785 | 40035517 ~ 40040594 (+) |
| G1547743 | NA | other | downstream | 815177 | 40201909 ~ 40202458 (+) |
