Gene
RNA
| Item | Value |
|---|---|
| gene id | G1547104 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 39414173 ~ 39414433 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1770323 | True | 261 | lncRNA | 0.43 | 1 | 39414173 | 39414433 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496205 | LOC100136448 | coding | downstream | 707 | 39389215 ~ 39413466 (-) |
| LOC110496204 | LOC106588420 | coding | downstream | 30683 | 39376443 ~ 39383490 (-) |
| LOC110496202 | LOC106569985 | coding | downstream | 41668 | 39358398 ~ 39372505 (-) |
| LOC110496203 | LOC106588426 | coding | downstream | 87135 | 39308819 ~ 39327038 (-) |
| LOC110496200 | LOC106588422 | coding | downstream | 118232 | 39269584 ~ 39295941 (-) |
| LOC110496206 | LOC106588419 | coding | upstream | 19352 | 39433785 ~ 39452164 (-) |
| LOC110496815 | LOC106588418 | coding | upstream | 52993 | 39467426 ~ 39566572 (-) |
| LOC110496207 | LOC100136435 | coding | upstream | 200237 | 39614670 ~ 39616840 (-) |
| LOC110496208 | LOC106588417 | coding | upstream | 211338 | 39625771 ~ 39641803 (-) |
| LOC110496816 | LOC106588265 | coding | upstream | 228408 | 39642841 ~ 39688750 (-) |
| G1547103 | NA | non-coding | downstream | 42 | 39413925 ~ 39414131 (-) |
| G1547052 | NA | non-coding | downstream | 29498 | 39374576 ~ 39384675 (-) |
| G1547041 | NA | non-coding | downstream | 145355 | 39268616 ~ 39268818 (-) |
| G1547039 | NA | non-coding | downstream | 149919 | 39263873 ~ 39264254 (-) |
| G1547038 | NA | non-coding | downstream | 150994 | 39262921 ~ 39263179 (-) |
| G1547107 | NA | non-coding | upstream | 2117 | 39416550 ~ 39416805 (-) |
| G1547131 | NA | non-coding | upstream | 38855 | 39453288 ~ 39453517 (-) |
| G1547132 | NA | non-coding | upstream | 39471 | 39453904 ~ 39454184 (-) |
| G1547172 | NA | non-coding | upstream | 116050 | 39530483 ~ 39530887 (-) |
| G1546396 | LOC106588446 | other | downstream | 626372 | 38776284 ~ 38787801 (-) |
| G1546385 | LOC106588448 | other | downstream | 640489 | 38768097 ~ 38773684 (-) |
| LOC110496175 | LOC104924380 | other | downstream | 738144 | 38674378 ~ 38676029 (-) |
| LOC110496167 | LOC106588455 | other | downstream | 850855 | 38557052 ~ 38563365 (-) |
| G1546053 | NA | other | downstream | 1200124 | 38165250 ~ 38214049 (-) |
| G1548367 | NA | other | upstream | 971537 | 40385970 ~ 40391883 (-) |
| G1548517 | NA | other | upstream | 1225742 | 40640175 ~ 40685641 (-) |
| LOC118941164 | LOC106588367 | other | upstream | 1491254 | 40902519 ~ 40908744 (-) |
