Gene
RNA
| Item | Value |
|---|---|
| gene id | G1546817 |
| gene name | LOC106588418 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 39467454 ~ 39469365 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| glutamate receptor ionotropic, kainate 5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1770013 | True | 1838 | TUCP | 0.47 | 2 | 39467454 | 39469365 |
39,464,000
39,464,400
39,464,800
39,465,200
39,465,600
39,466,000
39,466,400
39,466,800
39,467,200
39,467,600
39,468,000
39,468,400
39,468,800
39,469,200
39,469,600
39,470,000
39,470,400
39,470,800
39,471,200
39,471,600
NC_048582.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496201 | LOC106588424 | coding | upstream | 110330 | 39326837 ~ 39357124 (+) |
| LOC110496196 | LOC106588428 | coding | upstream | 237533 | 39221315 ~ 39229921 (+) |
| LOC110496194 | LOC106588429 | coding | upstream | 249246 | 39208209 ~ 39218208 (+) |
| LOC110496193 | LOC106588432 | coding | upstream | 264340 | 39195633 ~ 39203114 (+) |
| LOC110496191 | LOC106588431 | coding | upstream | 279826 | 39181006 ~ 39187628 (+) |
| LOC118940977 | NA | coding | downstream | 116505 | 39585870 ~ 39586862 (+) |
| LOC118941156 | ssl-2 | coding | downstream | 150354 | 39619719 ~ 39622185 (+) |
| LOC110496217 | LOC106569969 | coding | downstream | 595895 | 40065260 ~ 40077268 (+) |
| kifc1 | LOC106588407 | coding | downstream | 626463 | 40095828 ~ 40101459 (+) |
| LOC110496221 | LOC106588406 | coding | downstream | 634366 | 40103731 ~ 40110006 (+) |
| G1546815 | NA | non-coding | upstream | 1040 | 39465846 ~ 39466414 (+) |
| G1546813 | NA | non-coding | upstream | 3442 | 39460369 ~ 39464012 (+) |
| G1546808 | NA | non-coding | upstream | 13451 | 39453739 ~ 39454003 (+) |
| G1546793 | NA | non-coding | upstream | 30432 | 39433817 ~ 39437022 (+) |
| G1546774 | LOC100136448 | non-coding | upstream | 58301 | 39389340 ~ 39409153 (+) |
| G1546818 | NA | non-coding | downstream | 682 | 39470047 ~ 39490769 (+) |
| G1546868 | NA | non-coding | downstream | 61163 | 39530528 ~ 39531137 (+) |
| G1547215 | NA | non-coding | downstream | 120696 | 39590061 ~ 39590273 (+) |
| G1547222 | NA | non-coding | downstream | 130196 | 39599561 ~ 39599837 (+) |
| G1547223 | NA | non-coding | downstream | 130672 | 39600037 ~ 39600322 (+) |
| G1546713 | LOC106569985 | other | upstream | 94973 | 39358411 ~ 39372481 (+) |
| G1546641 | NA | other | upstream | 321202 | 39133119 ~ 39146252 (+) |
| G1546605 | LOC106588434 | other | upstream | 347435 | 39116488 ~ 39120019 (+) |
| LOC110496176 | LOC106588451 | other | upstream | 776185 | 38677975 ~ 38696088 (+) |
| G1545533 | LOC104965079 | other | upstream | 791450 | 38675027 ~ 38676004 (+) |
| G1547334 | LOC107666349 | other | downstream | 291848 | 39761213 ~ 39761503 (+) |
| G1547652 | LOC106588410 | other | downstream | 566152 | 40035517 ~ 40040594 (+) |
| G1547743 | NA | other | downstream | 732544 | 40201909 ~ 40202458 (+) |
| G1547788 | NA | other | downstream | 857110 | 40326475 ~ 40327181 (+) |
