G1546818


Basic Information

Item Value
gene id G1546818
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 39470047 ~ 39490769 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1770014
GAATAACAATGACCAACAcaaaacatagagacagagacagaggagtgtgagagagagagagagagagagagagagagagagagagagagagaaaaagagacagagagagagagacagagagacagagagagagagacagagagagagagagagacagagagagagacagagagagagagagacagagagagagagagagagagagagagagagagagagagagagccagagagagagagagtgagagagagagccagagagccagagagtgagagacatagagagagagtgagccagaaagagagagagagagagagacagagagtgagagacatagacagagagtgagccagagagacagagagtgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1770014 True 369 lncRNA 0.49 2 39470047 39490769

Neighbor

gene id symbol gene type direction distance location
LOC110496201 LOC106588424 coding upstream 112923 39326837 ~ 39357124 (+)
LOC110496196 LOC106588428 coding upstream 240126 39221315 ~ 39229921 (+)
LOC110496194 LOC106588429 coding upstream 251839 39208209 ~ 39218208 (+)
LOC110496193 LOC106588432 coding upstream 266933 39195633 ~ 39203114 (+)
LOC110496191 LOC106588431 coding upstream 282419 39181006 ~ 39187628 (+)
LOC118940977 NA coding downstream 95101 39585870 ~ 39586862 (+)
LOC118941156 ssl-2 coding downstream 128950 39619719 ~ 39622185 (+)
LOC110496217 LOC106569969 coding downstream 574491 40065260 ~ 40077268 (+)
kifc1 LOC106588407 coding downstream 605059 40095828 ~ 40101459 (+)
LOC110496221 LOC106588406 coding downstream 612962 40103731 ~ 40110006 (+)
G1546815 NA non-coding upstream 3633 39465846 ~ 39466414 (+)
G1546813 NA non-coding upstream 6035 39460369 ~ 39464012 (+)
G1546808 NA non-coding upstream 16044 39453739 ~ 39454003 (+)
G1546793 NA non-coding upstream 33025 39433817 ~ 39437022 (+)
G1546774 LOC100136448 non-coding upstream 60894 39389340 ~ 39409153 (+)
G1546868 NA non-coding downstream 39759 39530528 ~ 39531137 (+)
G1547215 NA non-coding downstream 99292 39590061 ~ 39590273 (+)
G1547222 NA non-coding downstream 108792 39599561 ~ 39599837 (+)
G1547223 NA non-coding downstream 109268 39600037 ~ 39600322 (+)
G1547253 LOC106569976 non-coding downstream 206865 39697634 ~ 39701800 (+)
G1546817 LOC106588418 other upstream 682 39467454 ~ 39469365 (+)
G1546713 LOC106569985 other upstream 97566 39358411 ~ 39372481 (+)
G1546641 NA other upstream 323795 39133119 ~ 39146252 (+)
G1546605 LOC106588434 other upstream 350028 39116488 ~ 39120019 (+)
LOC110496176 LOC106588451 other upstream 778778 38677975 ~ 38696088 (+)
G1547334 LOC107666349 other downstream 270444 39761213 ~ 39761503 (+)
G1547652 LOC106588410 other downstream 544748 40035517 ~ 40040594 (+)
G1547743 NA other downstream 711140 40201909 ~ 40202458 (+)
G1547788 NA other downstream 835706 40326475 ~ 40327181 (+)

Expression


Co-expression Network