Gene
RNA
| Item | Value |
|---|---|
| gene id | G1546868 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 39530528 ~ 39531137 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1770067 | False | 516 | lncRNA | 0.46 | 3 | 39530528 | 39531137 |
| TU1770071 | True | 563 | lncRNA | 0.46 | 2 | 39530528 | 39531137 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496201 | LOC106588424 | coding | upstream | 173404 | 39326837 ~ 39357124 (+) |
| LOC110496196 | LOC106588428 | coding | upstream | 300607 | 39221315 ~ 39229921 (+) |
| LOC110496194 | LOC106588429 | coding | upstream | 312320 | 39208209 ~ 39218208 (+) |
| LOC110496193 | LOC106588432 | coding | upstream | 327414 | 39195633 ~ 39203114 (+) |
| LOC110496191 | LOC106588431 | coding | upstream | 342900 | 39181006 ~ 39187628 (+) |
| LOC118940977 | NA | coding | downstream | 54733 | 39585870 ~ 39586862 (+) |
| LOC118941156 | ssl-2 | coding | downstream | 88582 | 39619719 ~ 39622185 (+) |
| LOC110496217 | LOC106569969 | coding | downstream | 534123 | 40065260 ~ 40077268 (+) |
| kifc1 | LOC106588407 | coding | downstream | 564691 | 40095828 ~ 40101459 (+) |
| LOC110496221 | LOC106588406 | coding | downstream | 572594 | 40103731 ~ 40110006 (+) |
| G1546818 | NA | non-coding | upstream | 39759 | 39470047 ~ 39490769 (+) |
| G1546815 | NA | non-coding | upstream | 64114 | 39465846 ~ 39466414 (+) |
| G1546813 | NA | non-coding | upstream | 66516 | 39460369 ~ 39464012 (+) |
| G1546808 | NA | non-coding | upstream | 76525 | 39453739 ~ 39454003 (+) |
| G1546793 | NA | non-coding | upstream | 93506 | 39433817 ~ 39437022 (+) |
| G1547215 | NA | non-coding | downstream | 58924 | 39590061 ~ 39590273 (+) |
| G1547222 | NA | non-coding | downstream | 68424 | 39599561 ~ 39599837 (+) |
| G1547223 | NA | non-coding | downstream | 68900 | 39600037 ~ 39600322 (+) |
| G1547253 | LOC106569976 | non-coding | downstream | 166497 | 39697634 ~ 39701800 (+) |
| G1547327 | NA | non-coding | downstream | 218451 | 39749588 ~ 39750020 (+) |
| G1546817 | LOC106588418 | other | upstream | 61163 | 39467454 ~ 39469365 (+) |
| G1546713 | LOC106569985 | other | upstream | 158047 | 39358411 ~ 39372481 (+) |
| G1546641 | NA | other | upstream | 384276 | 39133119 ~ 39146252 (+) |
| G1546605 | LOC106588434 | other | upstream | 410509 | 39116488 ~ 39120019 (+) |
| LOC110496176 | LOC106588451 | other | upstream | 839259 | 38677975 ~ 38696088 (+) |
| G1547334 | LOC107666349 | other | downstream | 230076 | 39761213 ~ 39761503 (+) |
| G1547652 | LOC106588410 | other | downstream | 504380 | 40035517 ~ 40040594 (+) |
| G1547743 | NA | other | downstream | 670772 | 40201909 ~ 40202458 (+) |
| G1547788 | NA | other | downstream | 795338 | 40326475 ~ 40327181 (+) |
