G1547222


Basic Information

Item Value
gene id G1547222
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 39599561 ~ 39599837 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1770449
acttaaaacttcttatggctgcaggggcagtattgagtagcttggatgaaaggtgcccagagtaaactgcctgctcctcagtcccagttgctaatatatgcatattattattagcagtggatagaaaacactctgacgtttctaaaactgtttgaatgatgtatgtgagtatatcAGAACtcactcatatggcaggcaaaaacctgagaagaaatccaaacaggaaatgggaaatctgaggttggtcgattttcaacccagcccctattgaatatac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1770449 True 277 lncRNA 0.40 1 39599561 39599837

Neighbor

gene id symbol gene type direction distance location
LOC118940977 NA coding upstream 12699 39585870 ~ 39586862 (+)
LOC110496201 LOC106588424 coding upstream 242437 39326837 ~ 39357124 (+)
LOC110496196 LOC106588428 coding upstream 369640 39221315 ~ 39229921 (+)
LOC110496194 LOC106588429 coding upstream 381353 39208209 ~ 39218208 (+)
LOC110496193 LOC106588432 coding upstream 396447 39195633 ~ 39203114 (+)
LOC118941156 ssl-2 coding downstream 19882 39619719 ~ 39622185 (+)
LOC110496217 LOC106569969 coding downstream 465423 40065260 ~ 40077268 (+)
kifc1 LOC106588407 coding downstream 495991 40095828 ~ 40101459 (+)
LOC110496221 LOC106588406 coding downstream 503894 40103731 ~ 40110006 (+)
LOC110496223 NA coding downstream 529623 40129460 ~ 40142425 (+)
G1547215 NA non-coding upstream 9288 39590061 ~ 39590273 (+)
G1546868 NA non-coding upstream 68424 39530528 ~ 39531137 (+)
G1546818 NA non-coding upstream 108792 39470047 ~ 39490769 (+)
G1546815 NA non-coding upstream 133147 39465846 ~ 39466414 (+)
G1546813 NA non-coding upstream 135549 39460369 ~ 39464012 (+)
G1547223 NA non-coding downstream 200 39600037 ~ 39600322 (+)
G1547253 LOC106569976 non-coding downstream 97797 39697634 ~ 39701800 (+)
G1547327 NA non-coding downstream 149751 39749588 ~ 39750020 (+)
G1547329 NA non-coding downstream 151873 39751710 ~ 39752942 (+)
G1547330 NA non-coding downstream 156363 39756200 ~ 39756869 (+)
G1546817 LOC106588418 other upstream 130196 39467454 ~ 39469365 (+)
G1546713 LOC106569985 other upstream 227080 39358411 ~ 39372481 (+)
G1546641 NA other upstream 453309 39133119 ~ 39146252 (+)
G1546605 LOC106588434 other upstream 479542 39116488 ~ 39120019 (+)
LOC110496176 LOC106588451 other upstream 908292 38677975 ~ 38696088 (+)
G1547334 LOC107666349 other downstream 161376 39761213 ~ 39761503 (+)
G1547652 LOC106588410 other downstream 435680 40035517 ~ 40040594 (+)
G1547743 NA other downstream 602072 40201909 ~ 40202458 (+)
G1547788 NA other downstream 726638 40326475 ~ 40327181 (+)

Expression


Co-expression Network