Gene
RNA
| Item | Value |
|---|---|
| gene id | G1547501 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 39736791 ~ 39736990 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1770762 | True | 200 | lncRNA | 0.40 | 1 | 39736791 | 39736990 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496209 | LOC106588416 | coding | downstream | 13255 | 39697624 ~ 39723536 (-) |
| LOC110496816 | LOC106588265 | coding | downstream | 48041 | 39642841 ~ 39688750 (-) |
| LOC110496208 | LOC106588417 | coding | downstream | 94988 | 39625771 ~ 39641803 (-) |
| LOC110496207 | LOC100136435 | coding | downstream | 119951 | 39614670 ~ 39616840 (-) |
| LOC110496815 | LOC106588418 | coding | downstream | 170300 | 39467426 ~ 39566572 (-) |
| LOC110496210 | LOC106588415 | coding | upstream | 18549 | 39755539 ~ 39825088 (-) |
| atp1a3a | LOC106588414 | coding | upstream | 127997 | 39864987 ~ 39897336 (-) |
| pvrl2l | LOC106588412 | coding | upstream | 196654 | 39933644 ~ 40019541 (-) |
| LOC110496213 | LOC106588411 | coding | upstream | 292660 | 40029650 ~ 40034564 (-) |
| LOC110496214 | LOC106588410 | coding | upstream | 301553 | 40038543 ~ 40048437 (-) |
| G1547474 | NA | non-coding | downstream | 57662 | 39678604 ~ 39679129 (-) |
| G1547454 | NA | non-coding | downstream | 125244 | 39609934 ~ 39611547 (-) |
| G1547442 | NA | non-coding | downstream | 142044 | 39594308 ~ 39594747 (-) |
| G1547441 | NA | non-coding | downstream | 144087 | 39592392 ~ 39592704 (-) |
| G1547440 | NA | non-coding | downstream | 145474 | 39591093 ~ 39591317 (-) |
| G1547510 | NA | non-coding | upstream | 13329 | 39750319 ~ 39750552 (-) |
| G1547537 | NA | non-coding | upstream | 70029 | 39807019 ~ 39807225 (-) |
| G1547550 | NA | non-coding | upstream | 100531 | 39837521 ~ 39837785 (-) |
| G1547558 | NA | non-coding | upstream | 119105 | 39856095 ~ 39856321 (-) |
| G1547561 | NA | non-coding | upstream | 120669 | 39857659 ~ 39857863 (-) |
| G1546396 | LOC106588446 | other | downstream | 948990 | 38776284 ~ 38787801 (-) |
| G1546385 | LOC106588448 | other | downstream | 963107 | 38768097 ~ 38773684 (-) |
| LOC110496175 | LOC104924380 | other | downstream | 1060762 | 38674378 ~ 38676029 (-) |
| G1548367 | NA | other | upstream | 648980 | 40385970 ~ 40391883 (-) |
| G1548517 | NA | other | upstream | 903185 | 40640175 ~ 40685641 (-) |
| LOC118941164 | LOC106588367 | other | upstream | 1168697 | 40902519 ~ 40908744 (-) |
| LOC110496277 | LOC106588347 | other | upstream | 1926446 | 41663436 ~ 41671516 (-) |
| G1550177 | LOC106569881 | other | upstream | 2578296 | 42315286 ~ 42316079 (-) |
