Gene
RNA
| Item | Value |
|---|---|
| gene id | G1547334 |
| gene name | LOC107666349 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 39761213 ~ 39761503 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| POU domain, class 2, transcription factor 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1770566 | True | 291 | TUCP | 0.56 | 1 | 39761213 | 39761503 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941156 | ssl-2 | coding | upstream | 139028 | 39619719 ~ 39622185 (+) |
| LOC118940977 | NA | coding | upstream | 174351 | 39585870 ~ 39586862 (+) |
| LOC110496201 | LOC106588424 | coding | upstream | 404089 | 39326837 ~ 39357124 (+) |
| LOC110496196 | LOC106588428 | coding | upstream | 531292 | 39221315 ~ 39229921 (+) |
| LOC110496194 | LOC106588429 | coding | upstream | 543005 | 39208209 ~ 39218208 (+) |
| LOC110496217 | LOC106569969 | coding | downstream | 303757 | 40065260 ~ 40077268 (+) |
| kifc1 | LOC106588407 | coding | downstream | 334325 | 40095828 ~ 40101459 (+) |
| LOC110496221 | LOC106588406 | coding | downstream | 342228 | 40103731 ~ 40110006 (+) |
| LOC110496223 | NA | coding | downstream | 367957 | 40129460 ~ 40142425 (+) |
| LOC110496224 | NA | coding | downstream | 402638 | 40164141 ~ 40199663 (+) |
| G1547333 | NA | non-coding | upstream | 764 | 39760052 ~ 39760449 (+) |
| G1547330 | NA | non-coding | upstream | 4344 | 39756200 ~ 39756869 (+) |
| G1547329 | NA | non-coding | upstream | 8271 | 39751710 ~ 39752942 (+) |
| G1547327 | NA | non-coding | upstream | 11193 | 39749588 ~ 39750020 (+) |
| G1547253 | LOC106569976 | non-coding | upstream | 59413 | 39697634 ~ 39701800 (+) |
| G1547337 | NA | non-coding | downstream | 2567 | 39764070 ~ 39764299 (+) |
| G1547367 | NA | non-coding | downstream | 52812 | 39814315 ~ 39814675 (+) |
| G1547381 | NA | non-coding | downstream | 72525 | 39834028 ~ 39834271 (+) |
| G1547382 | NA | non-coding | downstream | 72966 | 39834469 ~ 39835365 (+) |
| G1547384 | NA | non-coding | downstream | 75946 | 39837449 ~ 39837773 (+) |
| G1546817 | LOC106588418 | other | upstream | 291848 | 39467454 ~ 39469365 (+) |
| G1546713 | LOC106569985 | other | upstream | 388732 | 39358411 ~ 39372481 (+) |
| G1546641 | NA | other | upstream | 614961 | 39133119 ~ 39146252 (+) |
| G1546605 | LOC106588434 | other | upstream | 641194 | 39116488 ~ 39120019 (+) |
| LOC110496176 | LOC106588451 | other | upstream | 1069944 | 38677975 ~ 38696088 (+) |
| G1547652 | LOC106588410 | other | downstream | 274014 | 40035517 ~ 40040594 (+) |
| G1547743 | NA | other | downstream | 440406 | 40201909 ~ 40202458 (+) |
| G1547788 | NA | other | downstream | 564972 | 40326475 ~ 40327181 (+) |
| G1547817 | NA | other | downstream | 665605 | 40427108 ~ 40429520 (+) |
