G1547381


Basic Information

Item Value
gene id G1547381
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 39834028 ~ 39834271 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1770613
ACCTCTCTCTTGCTTACAcagagcgaggggggagagagataagaTGAGAGTACTGTTGGGAATCTGTTAgagtgaaaggagagaggaaggacatgTTGAGTGAGGAATGAaggagggggaatagagagatggagagaagcacataatagagaaatggagagaagaacagaatagagagaagaacagaatagagagatggagagaagaacagaatagagagatggagagaagaacagaatagagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1770613 True 244 lncRNA 0.44 1 39834028 39834271

Neighbor

gene id symbol gene type direction distance location
LOC118941156 ssl-2 coding upstream 211843 39619719 ~ 39622185 (+)
LOC118940977 NA coding upstream 247166 39585870 ~ 39586862 (+)
LOC110496201 LOC106588424 coding upstream 476904 39326837 ~ 39357124 (+)
LOC110496196 LOC106588428 coding upstream 604107 39221315 ~ 39229921 (+)
LOC110496194 LOC106588429 coding upstream 615820 39208209 ~ 39218208 (+)
LOC110496217 LOC106569969 coding downstream 230989 40065260 ~ 40077268 (+)
kifc1 LOC106588407 coding downstream 261557 40095828 ~ 40101459 (+)
LOC110496221 LOC106588406 coding downstream 269460 40103731 ~ 40110006 (+)
LOC110496223 NA coding downstream 295189 40129460 ~ 40142425 (+)
LOC110496224 NA coding downstream 329870 40164141 ~ 40199663 (+)
G1547367 NA non-coding upstream 19353 39814315 ~ 39814675 (+)
G1547337 NA non-coding upstream 69729 39764070 ~ 39764299 (+)
G1547333 NA non-coding upstream 73579 39760052 ~ 39760449 (+)
G1547330 NA non-coding upstream 77159 39756200 ~ 39756869 (+)
G1547329 NA non-coding upstream 81086 39751710 ~ 39752942 (+)
G1547382 NA non-coding downstream 198 39834469 ~ 39835365 (+)
G1547384 NA non-coding downstream 3178 39837449 ~ 39837773 (+)
G1547400 NA non-coding downstream 34586 39868857 ~ 39871465 (+)
G1547587 NA non-coding downstream 68951 39903222 ~ 39906256 (+)
G1547588 NA non-coding downstream 69357 39903628 ~ 39906755 (+)
G1547334 LOC107666349 other upstream 72525 39761213 ~ 39761503 (+)
G1546817 LOC106588418 other upstream 364663 39467454 ~ 39469365 (+)
G1546713 LOC106569985 other upstream 461547 39358411 ~ 39372481 (+)
G1546641 NA other upstream 687776 39133119 ~ 39146252 (+)
G1546605 LOC106588434 other upstream 714009 39116488 ~ 39120019 (+)
G1547652 LOC106588410 other downstream 201246 40035517 ~ 40040594 (+)
G1547743 NA other downstream 367638 40201909 ~ 40202458 (+)
G1547788 NA other downstream 492204 40326475 ~ 40327181 (+)
G1547817 NA other downstream 592837 40427108 ~ 40429520 (+)

Expression


Co-expression Network