Gene
RNA
| Item | Value |
|---|---|
| gene id | G1547382 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 39834469 ~ 39835365 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| keratin-associated protein 4-8-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1770614 | True | 624 | lncRNA | 0.43 | 2 | 39834469 | 39835365 |
39,830,800
39,831,200
39,831,600
39,832,000
39,832,400
39,832,800
39,833,200
39,833,600
39,834,000
39,834,400
39,834,800
39,835,200
39,835,600
39,836,000
39,836,400
NC_048582.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941156 | ssl-2 | coding | upstream | 212284 | 39619719 ~ 39622185 (+) |
| LOC118940977 | NA | coding | upstream | 247607 | 39585870 ~ 39586862 (+) |
| LOC110496201 | LOC106588424 | coding | upstream | 477345 | 39326837 ~ 39357124 (+) |
| LOC110496196 | LOC106588428 | coding | upstream | 604548 | 39221315 ~ 39229921 (+) |
| LOC110496194 | LOC106588429 | coding | upstream | 616261 | 39208209 ~ 39218208 (+) |
| LOC110496217 | LOC106569969 | coding | downstream | 229895 | 40065260 ~ 40077268 (+) |
| kifc1 | LOC106588407 | coding | downstream | 260463 | 40095828 ~ 40101459 (+) |
| LOC110496221 | LOC106588406 | coding | downstream | 268366 | 40103731 ~ 40110006 (+) |
| LOC110496223 | NA | coding | downstream | 294095 | 40129460 ~ 40142425 (+) |
| LOC110496224 | NA | coding | downstream | 328776 | 40164141 ~ 40199663 (+) |
| G1547381 | NA | non-coding | upstream | 198 | 39834028 ~ 39834271 (+) |
| G1547367 | NA | non-coding | upstream | 19794 | 39814315 ~ 39814675 (+) |
| G1547337 | NA | non-coding | upstream | 70170 | 39764070 ~ 39764299 (+) |
| G1547333 | NA | non-coding | upstream | 74020 | 39760052 ~ 39760449 (+) |
| G1547330 | NA | non-coding | upstream | 77600 | 39756200 ~ 39756869 (+) |
| G1547384 | NA | non-coding | downstream | 2084 | 39837449 ~ 39837773 (+) |
| G1547400 | NA | non-coding | downstream | 33492 | 39868857 ~ 39871465 (+) |
| G1547587 | NA | non-coding | downstream | 67857 | 39903222 ~ 39906256 (+) |
| G1547588 | NA | non-coding | downstream | 68263 | 39903628 ~ 39906755 (+) |
| G1547682 | NA | non-coding | downstream | 218832 | 40054197 ~ 40054426 (+) |
| G1547334 | LOC107666349 | other | upstream | 72966 | 39761213 ~ 39761503 (+) |
| G1546817 | LOC106588418 | other | upstream | 365104 | 39467454 ~ 39469365 (+) |
| G1546713 | LOC106569985 | other | upstream | 461988 | 39358411 ~ 39372481 (+) |
| G1546641 | NA | other | upstream | 688217 | 39133119 ~ 39146252 (+) |
| G1546605 | LOC106588434 | other | upstream | 714450 | 39116488 ~ 39120019 (+) |
| G1547652 | LOC106588410 | other | downstream | 200152 | 40035517 ~ 40040594 (+) |
| G1547743 | NA | other | downstream | 366544 | 40201909 ~ 40202458 (+) |
| G1547788 | NA | other | downstream | 491110 | 40326475 ~ 40327181 (+) |
| G1547817 | NA | other | downstream | 591743 | 40427108 ~ 40429520 (+) |
