Gene
RNA
| Item | Value |
|---|---|
| gene id | G1547550 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 39837521 ~ 39837785 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1770812 | True | 265 | lncRNA | 0.51 | 1 | 39837521 | 39837785 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496210 | LOC106588415 | coding | downstream | 12433 | 39755539 ~ 39825088 (-) |
| LOC110496209 | LOC106588416 | coding | downstream | 113985 | 39697624 ~ 39723536 (-) |
| LOC110496816 | LOC106588265 | coding | downstream | 148771 | 39642841 ~ 39688750 (-) |
| LOC110496208 | LOC106588417 | coding | downstream | 195718 | 39625771 ~ 39641803 (-) |
| LOC110496207 | LOC100136435 | coding | downstream | 220681 | 39614670 ~ 39616840 (-) |
| atp1a3a | LOC106588414 | coding | upstream | 27202 | 39864987 ~ 39897336 (-) |
| pvrl2l | LOC106588412 | coding | upstream | 95859 | 39933644 ~ 40019541 (-) |
| LOC110496213 | LOC106588411 | coding | upstream | 191865 | 40029650 ~ 40034564 (-) |
| LOC110496214 | LOC106588410 | coding | upstream | 200758 | 40038543 ~ 40048437 (-) |
| LOC110496215 | tbb5 | coding | upstream | 218609 | 40056394 ~ 40063549 (-) |
| G1547537 | NA | non-coding | downstream | 30296 | 39807019 ~ 39807225 (-) |
| G1547510 | NA | non-coding | downstream | 86969 | 39750319 ~ 39750552 (-) |
| G1547501 | NA | non-coding | downstream | 100531 | 39736791 ~ 39736990 (-) |
| G1547474 | NA | non-coding | downstream | 158392 | 39678604 ~ 39679129 (-) |
| G1547454 | NA | non-coding | downstream | 225974 | 39609934 ~ 39611547 (-) |
| G1547558 | NA | non-coding | upstream | 18310 | 39856095 ~ 39856321 (-) |
| G1547561 | NA | non-coding | upstream | 19874 | 39857659 ~ 39857863 (-) |
| G1547609 | NA | non-coding | upstream | 86854 | 39924639 ~ 39924993 (-) |
| G1548257 | NA | non-coding | upstream | 184003 | 40021788 ~ 40021998 (-) |
| G1548260 | NA | non-coding | upstream | 187451 | 40025236 ~ 40025442 (-) |
| G1546396 | LOC106588446 | other | downstream | 1049720 | 38776284 ~ 38787801 (-) |
| G1546385 | LOC106588448 | other | downstream | 1063837 | 38768097 ~ 38773684 (-) |
| LOC110496175 | LOC104924380 | other | downstream | 1161492 | 38674378 ~ 38676029 (-) |
| G1548367 | NA | other | upstream | 548185 | 40385970 ~ 40391883 (-) |
| G1548517 | NA | other | upstream | 802390 | 40640175 ~ 40685641 (-) |
| LOC118941164 | LOC106588367 | other | upstream | 1067902 | 40902519 ~ 40908744 (-) |
| LOC110496277 | LOC106588347 | other | upstream | 1825651 | 41663436 ~ 41671516 (-) |
| G1550177 | LOC106569881 | other | upstream | 2477501 | 42315286 ~ 42316079 (-) |
