Gene
RNA
| Item | Value |
|---|---|
| gene id | G1548260 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 40025236 ~ 40025442 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1771616 | True | 207 | lncRNA | 0.48 | 1 | 40025236 | 40025442 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pvrl2l | LOC106588412 | coding | downstream | 5695 | 39933644 ~ 40019541 (-) |
| atp1a3a | LOC106588414 | coding | downstream | 127900 | 39864987 ~ 39897336 (-) |
| LOC110496210 | LOC106588415 | coding | downstream | 200148 | 39755539 ~ 39825088 (-) |
| LOC110496209 | LOC106588416 | coding | downstream | 301700 | 39697624 ~ 39723536 (-) |
| LOC110496816 | LOC106588265 | coding | downstream | 336486 | 39642841 ~ 39688750 (-) |
| LOC110496213 | LOC106588411 | coding | upstream | 4208 | 40029650 ~ 40034564 (-) |
| LOC110496214 | LOC106588410 | coding | upstream | 13101 | 40038543 ~ 40048437 (-) |
| LOC110496215 | tbb5 | coding | upstream | 30952 | 40056394 ~ 40063549 (-) |
| LOC110496218 | LOC106588408 | coding | upstream | 54773 | 40080215 ~ 40093772 (-) |
| LOC110496219 | NA | coding | upstream | 61802 | 40087244 ~ 40087790 (-) |
| G1548257 | NA | non-coding | downstream | 3238 | 40021788 ~ 40021998 (-) |
| G1547609 | NA | non-coding | downstream | 100243 | 39924639 ~ 39924993 (-) |
| G1547561 | NA | non-coding | downstream | 167373 | 39857659 ~ 39857863 (-) |
| G1547558 | NA | non-coding | downstream | 168915 | 39856095 ~ 39856321 (-) |
| G1547550 | NA | non-coding | downstream | 187451 | 39837521 ~ 39837785 (-) |
| G1548270 | NA | non-coding | upstream | 27933 | 40053375 ~ 40053601 (-) |
| G1548317 | NA | non-coding | upstream | 129396 | 40154838 ~ 40169209 (-) |
| G1548323 | NA | non-coding | upstream | 145417 | 40170859 ~ 40182138 (-) |
| G1548324 | NA | non-coding | upstream | 146047 | 40171489 ~ 40172837 (-) |
| LOC110496208 | LOC106588417 | other | downstream | 394138 | 39625771 ~ 39641803 (-) |
| G1546396 | LOC106588446 | other | downstream | 1237435 | 38776284 ~ 38787801 (-) |
| G1546385 | LOC106588448 | other | downstream | 1251552 | 38768097 ~ 38773684 (-) |
| LOC110496175 | LOC104924380 | other | downstream | 1349207 | 38674378 ~ 38676029 (-) |
| G1548367 | NA | other | upstream | 360528 | 40385970 ~ 40391883 (-) |
| G1548517 | NA | other | upstream | 614733 | 40640175 ~ 40685641 (-) |
| LOC118941164 | LOC106588367 | other | upstream | 880245 | 40902519 ~ 40908744 (-) |
| LOC110496277 | LOC106588347 | other | upstream | 1637994 | 41663436 ~ 41671516 (-) |
| G1550177 | LOC106569881 | other | upstream | 2289844 | 42315286 ~ 42316079 (-) |
