XLOC_000347 (CT573186.1)



Basic Information


Item Value
gene id XLOC_000347
gene name CT573186.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 29444452 ~ 29445719 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00000596
TGAAGCACCGCTTGTGTGTCACTACCGGAGTCCCGCTGGTCCCGCCTCTGCCCCTTCCGTTCCTGCAGCATCTGCGGATAAGATTGGCTGTAGCCTGTGTTGCTGTCACCCCAGCTggattgcttttttttaaattcctggGCTGTGTTTTAATCTACAACTGCGTCCGTGAGTGCGGGTTGCTAAGTGGCTTGCAAACTAGAGgaGCTGAGGCTTCCAGGCAGGCCGTTAGTTGTCCATCGTGCGGTGGTGGGATACGACActgagtgcagtgtgtgtgtgttgtgtgctcaCGTAtgcctgtgtgcgtgtgtgtgtgatgcactTGCGGTAAGACCATTTGTAATTTTGTAGAGTTTGTTGCTATGTAACTAGCTTACCTGCCACTGGTAAGCCTCTACTCCTCctgttgttgttattgtgtgtTATTTATGTGATTGTGCGGCTACTATCAGCTATCAagctttttaaaagtgatttatattggataattaaggaaaataaagtatttttgtat

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093663

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00000596 True 517 lncRNA 0.47 3 29444452 29445719

Neighbor


gene id symbol gene type direction distance location
XLOC_000345 fam155a coding upstream 53418 29281764 ~ 29391034 (+)
XLOC_000346 BX908780.2 coding upstream 131893 29311527 ~ 29312559 (+)
XLOC_000344 lig4 coding upstream 172979 29267841 ~ 29271473 (+)
XLOC_000343 irs2a coding upstream 216059 29211540 ~ 29228393 (+)
XLOC_000342 cars2 coding upstream 241763 29183962 ~ 29202689 (+)
XLOC_000348 CT573186.2 coding downstream 5746 29451465 ~ 29452733 (+)
XLOC_000349 NA coding downstream 54589 29500308 ~ 29501034 (+)
XLOC_000350 CR774189.1 coding downstream 61928 29507647 ~ 29508473 (+)
XLOC_000351 si:dkey-228l14.1 coding downstream 69441 29515160 ~ 29519002 (+)
XLOC_000352 raph1b coding downstream 218617 29664336 ~ 29743640 (+)
XLOC_000340 BX908780.5 non-coding upstream 263804 29174195 ~ 29180648 (+)
XLOC_000336 CU469541.1 non-coding upstream 539817 28903770 ~ 28904635 (+)
XLOC_000335 NA non-coding upstream 971039 28472199 ~ 28473413 (+)
XLOC_000327 NA non-coding upstream 2703303 26740115 ~ 26741149 (+)
XLOC_000358 NA non-coding downstream 628916 30074635 ~ 30079529 (+)
XLOC_000360 dre-mir-740 non-coding downstream 720234 30165953 ~ 30166065 (+)

Expression



Co-expression Network