Gene
RNA
| Item | Value |
|---|---|
| gene id | G1548323 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 40170859 ~ 40182138 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1771698 | True | 478 | lncRNA | 0.42 | 3 | 40170859 | 40182138 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tapbp.1 | LOC100136299 | coding | downstream | 40664 | 40125565 ~ 40130195 (-) |
| LOC110496222 | LOC106588403 | coding | downstream | 47988 | 40111013 ~ 40122871 (-) |
| LOC110496218 | LOC106588408 | coding | downstream | 77087 | 40080215 ~ 40093772 (-) |
| LOC110496219 | NA | coding | downstream | 83069 | 40087244 ~ 40087790 (-) |
| LOC110496215 | tbb5 | coding | downstream | 107310 | 40056394 ~ 40063549 (-) |
| trnaa-ugc-138 | NA | coding | upstream | 5004 | 40187142 ~ 40187215 (-) |
| LOC118941158 | LOC106588400 | coding | upstream | 26326 | 40208464 ~ 40209202 (-) |
| LOC110496227 | LOC106569958 | coding | upstream | 28146 | 40210284 ~ 40213780 (-) |
| LOC110496231 | LOC106569953 | coding | upstream | 136907 | 40319045 ~ 40369178 (-) |
| LOC101268904 | LOC106588394 | coding | upstream | 210482 | 40392620 ~ 40416084 (-) |
| G1548317 | NA | non-coding | downstream | 1650 | 40154838 ~ 40169209 (-) |
| G1548270 | NA | non-coding | downstream | 117258 | 40053375 ~ 40053601 (-) |
| LOC110496213 | LOC106588411 | non-coding | downstream | 140356 | 40029650 ~ 40034564 (-) |
| G1548260 | NA | non-coding | downstream | 145417 | 40025236 ~ 40025442 (-) |
| G1548257 | NA | non-coding | downstream | 148861 | 40021788 ~ 40021998 (-) |
| G1548331 | NA | non-coding | upstream | 24501 | 40206639 ~ 40207042 (-) |
| G1548376 | NA | non-coding | upstream | 52982 | 40235120 ~ 40239085 (-) |
| G1548377 | NA | non-coding | upstream | 57414 | 40239552 ~ 40239752 (-) |
| G1548380 | NA | non-coding | upstream | 63214 | 40245352 ~ 40245648 (-) |
| G1548381 | NA | non-coding | upstream | 65865 | 40248003 ~ 40248270 (-) |
| LOC110496816 | LOC106588265 | other | downstream | 482178 | 39642841 ~ 39688750 (-) |
| LOC110496208 | LOC106588417 | other | downstream | 539761 | 39625771 ~ 39641803 (-) |
| G1546396 | LOC106588446 | other | downstream | 1383058 | 38776284 ~ 38787801 (-) |
| G1546385 | LOC106588448 | other | downstream | 1397175 | 38768097 ~ 38773684 (-) |
| LOC110496175 | LOC104924380 | other | downstream | 1494830 | 38674378 ~ 38676029 (-) |
| G1548367 | NA | other | upstream | 203832 | 40385970 ~ 40391883 (-) |
| G1548517 | NA | other | upstream | 458037 | 40640175 ~ 40685641 (-) |
| LOC118941164 | LOC106588367 | other | upstream | 723549 | 40902519 ~ 40908744 (-) |
| LOC110496277 | LOC106588347 | other | upstream | 1481298 | 41663436 ~ 41671516 (-) |
| G1550177 | LOC106569881 | other | upstream | 2133148 | 42315286 ~ 42316079 (-) |
