G1547745


Basic Information

Item Value
gene id G1547745
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 40203880 ~ 40204439 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1771036
gtcagcagacactgtggccccatccgatgataccaccagacagggccaaacaggcaggatataaccccacccactttgccaaagcacagcccccacaccactagagggatatcttcaaccaccaacttaccatcctgagacaaggccgagtatagcccacaaagatctccgccacggcacaacccaaggggggcgccaacccagacaggaagaccacgtcagtgactcaacccactcaagtgacacacccctcctaggtaCGGCATGGAAGAACACCAGTAAGTCAgggactcagcccctgtaatagggttagaggcagagaatcccagtggagagaggggaaccggccaggcagagacagcaagggcggtttgttgctccagtgcctttccgttcaccttcacactcctgggccagactacactcaatcataggacccactgaagagatgagtcttcagtaaagacttaaaggttgagaccaagtctgcgtctctcacatgtgtaggcagaccattccataaaaatggatctctataggagaaagccctgcctccagct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1771036 True 560 lncRNA 0.54 1 40203880 40204439

Neighbor

gene id symbol gene type direction distance location
LOC110496224 NA coding upstream 4217 40164141 ~ 40199663 (+)
LOC118941157 NA coding upstream 13473 40186240 ~ 40190407 (+)
LOC110496223 NA coding upstream 61455 40129460 ~ 40142425 (+)
LOC110496221 LOC106588406 coding upstream 93874 40103731 ~ 40110006 (+)
kifc1 LOC106588407 coding upstream 102421 40095828 ~ 40101459 (+)
psb9 lmp2/d coding downstream 9326 40213765 ~ 40223810 (+)
LOC100135882 psmb9a coding downstream 20362 40224801 ~ 40227438 (+)
LOC110496230 abcb3 coding downstream 23816 40228255 ~ 40234536 (+)
LOC118941049 NA coding downstream 31958 40236397 ~ 40238426 (+)
psb8 psb8 coding downstream 44749 40249188 ~ 40257284 (+)
G1547743 NA non-coding upstream 1422 40201909 ~ 40202458 (+)
G1547711 LOC107394864 non-coding upstream 115859 40085957 ~ 40088021 (+)
LOC110496217 LOC106569969 non-coding upstream 137553 40065260 ~ 40077268 (+)
G1547682 NA non-coding upstream 149454 40054197 ~ 40054426 (+)
G1547747 NA non-coding downstream 1001 40205440 ~ 40205726 (+)
G1547748 NA non-coding downstream 2332 40206771 ~ 40207040 (+)
G1547707 NA non-coding downstream 4001 40208440 ~ 40208701 (+)
G1547758 NA non-coding downstream 39344 40243783 ~ 40244074 (+)
G1547759 NA non-coding downstream 39917 40244356 ~ 40244927 (+)
G1547652 LOC106588410 other upstream 163286 40035517 ~ 40040594 (+)
G1547334 LOC107666349 other upstream 442377 39761213 ~ 39761503 (+)
G1546817 LOC106588418 other upstream 734515 39467454 ~ 39469365 (+)
G1547788 NA other downstream 122036 40326475 ~ 40327181 (+)
G1547817 NA other downstream 222669 40427108 ~ 40429520 (+)
G1547834 rps18 other downstream 265930 40469109 ~ 40471582 (+)
G1547904 NA other downstream 503579 40708018 ~ 40717744 (+)
LOC110496251 LOC106569933 other downstream 533179 40736719 ~ 40738475 (+)

Expression


Co-expression Network