G1547760


Basic Information

Item Value
gene id G1547760
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 40246641 ~ 40246857 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1771051
ctatagctcagcattcaacaccatagtaccctccaaactaatcattaagcttgaggccgtGGGTCTGAATggcaccctgtgcaactgggtcctggactttctgacggtccgcccccaggtggtgaaggtaggaaacaacacttcgctgatcctcaacactggggccccacaaggatgcatgctcagccccctcctgtactccctgttcaccaatgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1771051 True 217 lncRNA 0.54 1 40246641 40246857

Neighbor

gene id symbol gene type direction distance location
LOC118941049 NA coding upstream 8215 40236397 ~ 40238426 (+)
LOC110496230 abcb3 coding upstream 12105 40228255 ~ 40234536 (+)
LOC100135882 psmb9a coding upstream 19203 40224801 ~ 40227438 (+)
psb9 lmp2/d coding upstream 22831 40213765 ~ 40223810 (+)
LOC118941157 NA coding upstream 56234 40186240 ~ 40190407 (+)
psb8 psb8 coding downstream 2331 40249188 ~ 40257284 (+)
LOC110496233 brd2 coding downstream 50196 40297053 ~ 40309566 (+)
LOC118941159 NA coding downstream 69366 40316169 ~ 40318834 (+)
LOC110496235 LOC106588392 coding downstream 213616 40460473 ~ 40464209 (+)
vps52 vps52 coding downstream 225291 40408575 ~ 40517763 (+)
G1547759 NA non-coding upstream 1714 40244356 ~ 40244927 (+)
G1547758 NA non-coding upstream 2567 40243783 ~ 40244074 (+)
G1547707 NA non-coding upstream 37940 40208440 ~ 40208701 (+)
G1547748 NA non-coding upstream 39601 40206771 ~ 40207040 (+)
G1547747 NA non-coding upstream 40915 40205440 ~ 40205726 (+)
G1547761 NA non-coding downstream 906 40247763 ~ 40247977 (+)
G1547770 NA non-coding downstream 36545 40283402 ~ 40283714 (+)
G1547771 NA non-coding downstream 38062 40284919 ~ 40285314 (+)
G1547773 NA non-coding downstream 40195 40287052 ~ 40287342 (+)
G1547743 NA other upstream 44183 40201909 ~ 40202458 (+)
LOC110496221 LOC106588406 other upstream 139795 40103731 ~ 40110006 (+)
G1547652 LOC106588410 other upstream 206047 40035517 ~ 40040594 (+)
G1547334 LOC107666349 other upstream 485138 39761213 ~ 39761503 (+)
G1546817 LOC106588418 other upstream 777276 39467454 ~ 39469365 (+)
G1547788 NA other downstream 79618 40326475 ~ 40327181 (+)
G1547817 NA other downstream 180251 40427108 ~ 40429520 (+)
G1547834 rps18 other downstream 223512 40469109 ~ 40471582 (+)
G1547904 NA other downstream 461161 40708018 ~ 40717744 (+)
LOC110496251 LOC106569933 other downstream 490761 40736719 ~ 40738475 (+)

Expression


Co-expression Network