Gene
RNA
| Item | Value |
|---|---|
| gene id | G1547761 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 40247763 ~ 40247977 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1771052 | True | 215 | lncRNA | 0.38 | 1 | 40247763 | 40247977 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941049 | NA | coding | upstream | 9337 | 40236397 ~ 40238426 (+) |
| LOC110496230 | abcb3 | coding | upstream | 13227 | 40228255 ~ 40234536 (+) |
| LOC100135882 | psmb9a | coding | upstream | 20325 | 40224801 ~ 40227438 (+) |
| psb9 | lmp2/d | coding | upstream | 23953 | 40213765 ~ 40223810 (+) |
| LOC118941157 | NA | coding | upstream | 57356 | 40186240 ~ 40190407 (+) |
| psb8 | psb8 | coding | downstream | 1211 | 40249188 ~ 40257284 (+) |
| LOC110496233 | brd2 | coding | downstream | 49076 | 40297053 ~ 40309566 (+) |
| LOC118941159 | NA | coding | downstream | 68246 | 40316169 ~ 40318834 (+) |
| LOC110496235 | LOC106588392 | coding | downstream | 212496 | 40460473 ~ 40464209 (+) |
| vps52 | vps52 | coding | downstream | 224171 | 40408575 ~ 40517763 (+) |
| G1547760 | NA | non-coding | upstream | 906 | 40246641 ~ 40246857 (+) |
| G1547759 | NA | non-coding | upstream | 2836 | 40244356 ~ 40244927 (+) |
| G1547758 | NA | non-coding | upstream | 3689 | 40243783 ~ 40244074 (+) |
| G1547707 | NA | non-coding | upstream | 39062 | 40208440 ~ 40208701 (+) |
| G1547748 | NA | non-coding | upstream | 40723 | 40206771 ~ 40207040 (+) |
| G1547770 | NA | non-coding | downstream | 35425 | 40283402 ~ 40283714 (+) |
| G1547771 | NA | non-coding | downstream | 36942 | 40284919 ~ 40285314 (+) |
| G1547773 | NA | non-coding | downstream | 39075 | 40287052 ~ 40287342 (+) |
| G1547697 | LOC106588396 | non-coding | downstream | 74312 | 40322289 ~ 40322867 (+) |
| G1547743 | NA | other | upstream | 45305 | 40201909 ~ 40202458 (+) |
| LOC110496221 | LOC106588406 | other | upstream | 140917 | 40103731 ~ 40110006 (+) |
| G1547652 | LOC106588410 | other | upstream | 207169 | 40035517 ~ 40040594 (+) |
| G1547334 | LOC107666349 | other | upstream | 486260 | 39761213 ~ 39761503 (+) |
| G1546817 | LOC106588418 | other | upstream | 778398 | 39467454 ~ 39469365 (+) |
| G1547788 | NA | other | downstream | 78498 | 40326475 ~ 40327181 (+) |
| G1547817 | NA | other | downstream | 179131 | 40427108 ~ 40429520 (+) |
| G1547834 | rps18 | other | downstream | 222392 | 40469109 ~ 40471582 (+) |
| G1547904 | NA | other | downstream | 460041 | 40708018 ~ 40717744 (+) |
| LOC110496251 | LOC106569933 | other | downstream | 489641 | 40736719 ~ 40738475 (+) |
