Gene
RNA
| Item | Value |
|---|---|
| gene id | G1548381 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 40248003 ~ 40248270 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein EH28_06569 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1771760 | True | 268 | lncRNA | 0.45 | 1 | 40248003 | 40248270 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496227 | LOC106569958 | coding | downstream | 34223 | 40210284 ~ 40213780 (-) |
| LOC118941158 | LOC106588400 | coding | downstream | 38801 | 40208464 ~ 40209202 (-) |
| trnaa-ugc-138 | NA | coding | downstream | 60788 | 40187142 ~ 40187215 (-) |
| tapbp.1 | LOC100136299 | coding | downstream | 117808 | 40125565 ~ 40130195 (-) |
| LOC110496222 | LOC106588403 | coding | downstream | 125132 | 40111013 ~ 40122871 (-) |
| LOC110496231 | LOC106569953 | coding | upstream | 70775 | 40319045 ~ 40369178 (-) |
| LOC101268904 | LOC106588394 | coding | upstream | 144350 | 40392620 ~ 40416084 (-) |
| LOC100136269 | LOC106588393 | coding | upstream | 169305 | 40417575 ~ 40429473 (-) |
| LOC110496236 | NA | coding | upstream | 196985 | 40445255 ~ 40455548 (-) |
| rps18 | LOC107726165 | coding | upstream | 220839 | 40469109 ~ 40471565 (-) |
| G1548380 | NA | non-coding | downstream | 2355 | 40245352 ~ 40245648 (-) |
| G1548377 | NA | non-coding | downstream | 8251 | 40239552 ~ 40239752 (-) |
| G1548376 | NA | non-coding | downstream | 8918 | 40235120 ~ 40239085 (-) |
| G1548331 | NA | non-coding | downstream | 40961 | 40206639 ~ 40207042 (-) |
| G1548323 | NA | non-coding | downstream | 65865 | 40170859 ~ 40182138 (-) |
| G1548384 | NA | non-coding | upstream | 11874 | 40260144 ~ 40260373 (-) |
| G1548385 | NA | non-coding | upstream | 12180 | 40260450 ~ 40260882 (-) |
| G1548386 | NA | non-coding | upstream | 12980 | 40261250 ~ 40261636 (-) |
| G1548387 | NA | non-coding | upstream | 13507 | 40261777 ~ 40262089 (-) |
| G1548388 | NA | non-coding | upstream | 13866 | 40262136 ~ 40262463 (-) |
| LOC110496816 | LOC106588265 | other | downstream | 559322 | 39642841 ~ 39688750 (-) |
| LOC110496208 | LOC106588417 | other | downstream | 616905 | 39625771 ~ 39641803 (-) |
| G1546396 | LOC106588446 | other | downstream | 1460202 | 38776284 ~ 38787801 (-) |
| G1546385 | LOC106588448 | other | downstream | 1474319 | 38768097 ~ 38773684 (-) |
| LOC110496175 | LOC104924380 | other | downstream | 1571974 | 38674378 ~ 38676029 (-) |
| G1548367 | NA | other | upstream | 137700 | 40385970 ~ 40391883 (-) |
| G1548517 | NA | other | upstream | 391905 | 40640175 ~ 40685641 (-) |
| LOC118941164 | LOC106588367 | other | upstream | 657417 | 40902519 ~ 40908744 (-) |
| LOC110496277 | LOC106588347 | other | upstream | 1415166 | 41663436 ~ 41671516 (-) |
| G1550177 | LOC106569881 | other | upstream | 2067016 | 42315286 ~ 42316079 (-) |
