Gene
RNA
| Item | Value |
|---|---|
| gene id | G1548386 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 40261250 ~ 40261636 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| sub-family B ATP-binding cassette transporter 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1771765 | True | 387 | lncRNA | 0.48 | 1 | 40261250 | 40261636 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496227 | LOC106569958 | coding | downstream | 47470 | 40210284 ~ 40213780 (-) |
| LOC118941158 | LOC106588400 | coding | downstream | 52048 | 40208464 ~ 40209202 (-) |
| trnaa-ugc-138 | NA | coding | downstream | 74035 | 40187142 ~ 40187215 (-) |
| tapbp.1 | LOC100136299 | coding | downstream | 131055 | 40125565 ~ 40130195 (-) |
| LOC110496222 | LOC106588403 | coding | downstream | 138379 | 40111013 ~ 40122871 (-) |
| LOC110496231 | LOC106569953 | coding | upstream | 57409 | 40319045 ~ 40369178 (-) |
| LOC101268904 | LOC106588394 | coding | upstream | 130984 | 40392620 ~ 40416084 (-) |
| LOC100136269 | LOC106588393 | coding | upstream | 155939 | 40417575 ~ 40429473 (-) |
| LOC110496236 | NA | coding | upstream | 183619 | 40445255 ~ 40455548 (-) |
| rps18 | LOC107726165 | coding | upstream | 207473 | 40469109 ~ 40471565 (-) |
| G1548385 | NA | non-coding | downstream | 368 | 40260450 ~ 40260882 (-) |
| G1548384 | NA | non-coding | downstream | 877 | 40260144 ~ 40260373 (-) |
| G1548381 | NA | non-coding | downstream | 12980 | 40248003 ~ 40248270 (-) |
| G1548380 | NA | non-coding | downstream | 15602 | 40245352 ~ 40245648 (-) |
| G1548377 | NA | non-coding | downstream | 21498 | 40239552 ~ 40239752 (-) |
| G1548387 | NA | non-coding | upstream | 141 | 40261777 ~ 40262089 (-) |
| G1548388 | NA | non-coding | upstream | 500 | 40262136 ~ 40262463 (-) |
| G1548390 | NA | non-coding | upstream | 2451 | 40264087 ~ 40264391 (-) |
| G1548391 | NA | non-coding | upstream | 2818 | 40264454 ~ 40264653 (-) |
| G1548403 | NA | non-coding | upstream | 17044 | 40278680 ~ 40278898 (-) |
| LOC110496816 | LOC106588265 | other | downstream | 572569 | 39642841 ~ 39688750 (-) |
| LOC110496208 | LOC106588417 | other | downstream | 630152 | 39625771 ~ 39641803 (-) |
| G1546396 | LOC106588446 | other | downstream | 1473449 | 38776284 ~ 38787801 (-) |
| G1546385 | LOC106588448 | other | downstream | 1487566 | 38768097 ~ 38773684 (-) |
| LOC110496175 | LOC104924380 | other | downstream | 1585221 | 38674378 ~ 38676029 (-) |
| G1548367 | NA | other | upstream | 124334 | 40385970 ~ 40391883 (-) |
| G1548517 | NA | other | upstream | 378539 | 40640175 ~ 40685641 (-) |
| LOC118941164 | LOC106588367 | other | upstream | 644051 | 40902519 ~ 40908744 (-) |
| LOC110496277 | LOC106588347 | other | upstream | 1401800 | 41663436 ~ 41671516 (-) |
| G1550177 | LOC106569881 | other | upstream | 2053650 | 42315286 ~ 42316079 (-) |
