Gene
RNA
| Item | Value |
|---|---|
| gene id | G1548418 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 40316985 ~ 40317221 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| glucoside xylosyltransferase 2-like isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1771799 | True | 237 | lncRNA | 0.40 | 1 | 40316985 | 40317221 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496227 | LOC106569958 | coding | downstream | 103205 | 40210284 ~ 40213780 (-) |
| LOC118941158 | LOC106588400 | coding | downstream | 107783 | 40208464 ~ 40209202 (-) |
| trnaa-ugc-138 | NA | coding | downstream | 129770 | 40187142 ~ 40187215 (-) |
| tapbp.1 | LOC100136299 | coding | downstream | 186790 | 40125565 ~ 40130195 (-) |
| LOC110496222 | LOC106588403 | coding | downstream | 194114 | 40111013 ~ 40122871 (-) |
| LOC110496231 | LOC106569953 | coding | upstream | 1824 | 40319045 ~ 40369178 (-) |
| LOC101268904 | LOC106588394 | coding | upstream | 75399 | 40392620 ~ 40416084 (-) |
| LOC100136269 | LOC106588393 | coding | upstream | 100354 | 40417575 ~ 40429473 (-) |
| LOC110496236 | NA | coding | upstream | 128034 | 40445255 ~ 40455548 (-) |
| rps18 | LOC107726165 | coding | upstream | 151888 | 40469109 ~ 40471565 (-) |
| G1548417 | NA | non-coding | downstream | 402 | 40316319 ~ 40316583 (-) |
| G1548413 | NA | non-coding | downstream | 4972 | 40311798 ~ 40312013 (-) |
| G1548403 | NA | non-coding | downstream | 38087 | 40278680 ~ 40278898 (-) |
| G1548391 | NA | non-coding | downstream | 52332 | 40264454 ~ 40264653 (-) |
| G1548390 | NA | non-coding | downstream | 52594 | 40264087 ~ 40264391 (-) |
| G1548439 | NA | non-coding | upstream | 52825 | 40370046 ~ 40370378 (-) |
| G1548508 | NA | non-coding | upstream | 201352 | 40518573 ~ 40518783 (-) |
| G1548520 | NA | non-coding | upstream | 225770 | 40542991 ~ 40543403 (-) |
| G1548521 | NA | non-coding | upstream | 227446 | 40544667 ~ 40544898 (-) |
| LOC110496816 | LOC106588265 | other | downstream | 628304 | 39642841 ~ 39688750 (-) |
| LOC110496208 | LOC106588417 | other | downstream | 685887 | 39625771 ~ 39641803 (-) |
| G1546396 | LOC106588446 | other | downstream | 1529184 | 38776284 ~ 38787801 (-) |
| G1546385 | LOC106588448 | other | downstream | 1543301 | 38768097 ~ 38773684 (-) |
| LOC110496175 | LOC104924380 | other | downstream | 1640956 | 38674378 ~ 38676029 (-) |
| G1548367 | NA | other | upstream | 68749 | 40385970 ~ 40391883 (-) |
| G1548517 | NA | other | upstream | 322954 | 40640175 ~ 40685641 (-) |
| LOC118941164 | LOC106588367 | other | upstream | 588466 | 40902519 ~ 40908744 (-) |
| LOC110496277 | LOC106588347 | other | upstream | 1346215 | 41663436 ~ 41671516 (-) |
| G1550177 | LOC106569881 | other | upstream | 1998065 | 42315286 ~ 42316079 (-) |
