Gene
RNA
| Item | Value |
|---|---|
| gene id | G1547911 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 40563530 ~ 40563743 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1771217 | True | 214 | lncRNA | 0.41 | 1 | 40563530 | 40563743 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496240 | LOC106588375 | coding | upstream | 21381 | 40525885 ~ 40542149 (+) |
| LOC110496243 | LOC106588384 | coding | upstream | 62786 | 40487954 ~ 40500744 (+) |
| vps52 | vps52 | coding | upstream | 79190 | 40408575 ~ 40517763 (+) |
| LOC110496235 | LOC106588392 | coding | upstream | 99321 | 40460473 ~ 40464209 (+) |
| LOC118941159 | NA | coding | upstream | 244696 | 40316169 ~ 40318834 (+) |
| LOC110496242 | LOC106588382 | coding | downstream | 43547 | 40607290 ~ 40611845 (+) |
| LOC110496244 | LOC106588385 | coding | downstream | 48153 | 40611896 ~ 40619490 (+) |
| LOC118941160 | NA | coding | downstream | 60111 | 40623854 ~ 40626108 (+) |
| LOC118936567 | LOC106588378 | coding | downstream | 65786 | 40629529 ~ 40640690 (+) |
| LOC110496247 | LOC106569935 | coding | downstream | 82263 | 40646006 ~ 40660558 (+) |
| G1547910 | NA | non-coding | upstream | 1006 | 40562319 ~ 40562524 (+) |
| G1547888 | NA | non-coding | upstream | 18702 | 40544475 ~ 40544828 (+) |
| G1547880 | NA | non-coding | upstream | 42939 | 40520287 ~ 40520591 (+) |
| G1547834 | rps18 | non-coding | upstream | 91948 | 40469109 ~ 40471582 (+) |
| G1547815 | NA | non-coding | upstream | 143134 | 40417407 ~ 40420396 (+) |
| LOC110496237 | LOC105028059 | non-coding | downstream | 10904 | 40562970 ~ 40601009 (+) |
| G1547926 | NA | non-coding | downstream | 18217 | 40581960 ~ 40582164 (+) |
| G1547930 | NA | non-coding | downstream | 26176 | 40589919 ~ 40590145 (+) |
| G1547944 | NA | non-coding | downstream | 58505 | 40622248 ~ 40622758 (+) |
| G1547817 | NA | other | upstream | 134010 | 40427108 ~ 40429520 (+) |
| G1547788 | NA | other | upstream | 236349 | 40326475 ~ 40327181 (+) |
| G1547743 | NA | other | upstream | 361072 | 40201909 ~ 40202458 (+) |
| LOC110496221 | LOC106588406 | other | upstream | 456684 | 40103731 ~ 40110006 (+) |
| G1547904 | NA | other | downstream | 144275 | 40708018 ~ 40717744 (+) |
| LOC110496251 | LOC106569933 | other | downstream | 173875 | 40736719 ~ 40738475 (+) |
| G1548171 | ndufb9 | other | downstream | 601811 | 41165554 ~ 41169102 (+) |
| G1549270 | NA | other | downstream | 1073579 | 41637322 ~ 41638401 (+) |
| LOC110496278 | LOC106588345 | other | downstream | 1104536 | 41667929 ~ 41713715 (+) |
