Gene
RNA
| Item | Value |
|---|---|
| gene id | G1548559 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 40609535 ~ 40609820 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| proteasome subunit beta type-7-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1771955 | True | 286 | lncRNA | 0.44 | 1 | 40609535 | 40609820 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496249 | NA | coding | downstream | 55916 | 40545209 ~ 40553619 (-) |
| LOC118941163 | NA | coding | downstream | 106057 | 40501665 ~ 40503478 (-) |
| LOC118941162 | NA | coding | downstream | 108125 | 40500738 ~ 40501410 (-) |
| LOC100653472 | LOC100653472 | coding | downstream | 121895 | 40485361 ~ 40487640 (-) |
| rps18 | LOC107726165 | coding | downstream | 137970 | 40469109 ~ 40471565 (-) |
| LOC118941161 | NA | coding | upstream | 65649 | 40675469 ~ 40678077 (-) |
| LOC110496253 | LOC106588368 | coding | upstream | 177007 | 40786827 ~ 40807771 (-) |
| LOC110496254 | col14a1 | coding | upstream | 205007 | 40814827 ~ 40901992 (-) |
| LOC118941164 | LOC106588367 | coding | upstream | 293936 | 40902519 ~ 40908744 (-) |
| ndufb9 | ndufb9 | coding | upstream | 555719 | 41165539 ~ 41169132 (-) |
| G1548557 | NA | non-coding | downstream | 3394 | 40605927 ~ 40606141 (-) |
| G1548556 | NA | non-coding | downstream | 3912 | 40605417 ~ 40605623 (-) |
| G1548518 | NA | non-coding | downstream | 7841 | 40600473 ~ 40601694 (-) |
| G1548548 | LOC106588374 | non-coding | downstream | 18336 | 40590887 ~ 40591199 (-) |
| G1548540 | LOC106588374 | non-coding | downstream | 28732 | 40579590 ~ 40580803 (-) |
| G1548568 | NA | non-coding | upstream | 7381 | 40617201 ~ 40618037 (-) |
| G1548571 | NA | non-coding | upstream | 11302 | 40621122 ~ 40621355 (-) |
| G1548513 | NA | non-coding | upstream | 32365 | 40642185 ~ 40697475 (-) |
| G1548512 | LOC106588380 | non-coding | upstream | 37142 | 40646962 ~ 40694732 (-) |
| G1548581 | NA | non-coding | upstream | 41522 | 40651342 ~ 40653242 (-) |
| G1548367 | NA | other | downstream | 217652 | 40385970 ~ 40391883 (-) |
| LOC110496816 | LOC106588265 | other | downstream | 920854 | 39642841 ~ 39688750 (-) |
| LOC110496208 | LOC106588417 | other | downstream | 978437 | 39625771 ~ 39641803 (-) |
| G1546396 | LOC106588446 | other | downstream | 1821734 | 38776284 ~ 38787801 (-) |
| G1546385 | LOC106588448 | other | downstream | 1835851 | 38768097 ~ 38773684 (-) |
| G1548517 | NA | other | upstream | 30355 | 40640175 ~ 40685641 (-) |
| LOC110496277 | LOC106588347 | other | upstream | 1053616 | 41663436 ~ 41671516 (-) |
| G1550177 | LOC106569881 | other | upstream | 1705466 | 42315286 ~ 42316079 (-) |
| G1550202 | NA | other | upstream | 1749328 | 42359148 ~ 42359628 (-) |
