G1548613


Basic Information

Item Value
gene id G1548613
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 40742733 ~ 40743516 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1772022
TTTTTGACAAATCCACGACGTGACTTACaataaggcattgttggcagaatagatggatacagttcaatgcatgatttacataatacaccactacatttcttggtagtctaATTTTTTTATTGCTagcaggttgtaaatcacagctggcctggtagaTTGTTTACTGCCTCcacccatttgggatgcactgtttcagtttcaattacTCCATATTTTGAACAAAAATGGACaactgtaactaaggctgggaatgaccatacaatcaaactagcaagggcaataaTCCCAAATCAGTCACAATGGGGTTAATAGGCTAGCGCACATGTGTCAAACAAGGCCTGCGGGCCAAATAGAACACACAAGCAAGTATAAATTAGTCAACAGTTCAGTCATCTACTCTATGAAATTACAGCCTGATGTGCTCCCATCCAGTGTTGCCAAATAATTTTCAAGGTAAATTGCTAGAGGCaggttgatttgttgctaaatgacgttgtgatgtcattgcgtgATAACGTAAAACTGCGTTACGTAGAATACACAATAACGTTACTCAGATTGACTGGCCATCTCTGCAAAAAATAAGATTTGACATTTGTTCATGTCGACTCCCACTCTTTTCTGTACTTCTGGCTGTACAATTTTGTTTGACACttgttgattgatgttgtaagttctgttcaagatcaaTCATTCGTTaccaactacactgctcaaaaaaagaaagggaacacttaaacaacacaatgtaactccaagtcaatcacacttctgtgaaatcaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1772022 True 784 lncRNA 0.38 1 40742733 40743516

Neighbor

gene id symbol gene type direction distance location
LOC118941161 NA coding downstream 64656 40675469 ~ 40678077 (-)
LOC110496249 NA coding downstream 189114 40545209 ~ 40553619 (-)
LOC118941163 NA coding downstream 239255 40501665 ~ 40503478 (-)
LOC118941162 NA coding downstream 241323 40500738 ~ 40501410 (-)
LOC100653472 LOC100653472 coding downstream 255093 40485361 ~ 40487640 (-)
LOC110496253 LOC106588368 coding upstream 43311 40786827 ~ 40807771 (-)
LOC110496254 col14a1 coding upstream 71311 40814827 ~ 40901992 (-)
LOC118941164 LOC106588367 coding upstream 160240 40902519 ~ 40908744 (-)
ndufb9 ndufb9 coding upstream 422023 41165539 ~ 41169132 (-)
LOC110496267 LOC106588355 coding upstream 482169 41225685 ~ 41327540 (-)
G1548612 LOC106588371 non-coding downstream 1743 40736764 ~ 40740990 (-)
G1548513 NA non-coding downstream 45258 40642185 ~ 40697475 (-)
G1548512 LOC106588380 non-coding downstream 48001 40646962 ~ 40694732 (-)
G1548581 NA non-coding downstream 89491 40651342 ~ 40653242 (-)
G1548571 NA non-coding downstream 121378 40621122 ~ 40621355 (-)
G1548627 NA non-coding upstream 16829 40760345 ~ 40760570 (-)
G1548631 NA non-coding upstream 40462 40783978 ~ 40786646 (-)
G1548647 NA non-coding upstream 87849 40831365 ~ 40831747 (-)
G1548658 NA non-coding upstream 107101 40850617 ~ 40850823 (-)
G1548678 NA non-coding upstream 146076 40889592 ~ 40957871 (-)
G1548517 NA other downstream 57092 40640175 ~ 40685641 (-)
G1548367 NA other downstream 350850 40385970 ~ 40391883 (-)
LOC110496816 LOC106588265 other downstream 1054052 39642841 ~ 39688750 (-)
LOC110496208 LOC106588417 other downstream 1111635 39625771 ~ 39641803 (-)
G1546396 LOC106588446 other downstream 1954932 38776284 ~ 38787801 (-)
LOC110496277 LOC106588347 other upstream 919920 41663436 ~ 41671516 (-)
G1550177 LOC106569881 other upstream 1571770 42315286 ~ 42316079 (-)
G1550202 NA other upstream 1615632 42359148 ~ 42359628 (-)
LOC118936491 LOC106588302 other upstream 2151515 42895031 ~ 43015119 (-)

Expression


Co-expression Network