G1548171 (ndufb9)


Basic Information

Item Value
gene id G1548171
gene name ndufb9
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 41165554 ~ 41169102 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1771519
TATTTAAACAGATGTCCTTGTACAGGAAAATAAGTACATTTGAAAGTCATTCAGGCAGGGTGGAATATCTTTTGACAAAACATACTGCAACAACTCCATTATATAATTATCTTTACAGATGGATAGTAATTCCCCAGGAGGTGAATCTGCATGCTGTTGTGTGGTAGTAGGTACCGTGGTGAGCTGCCATGTGCCACTATGGAGTTATCACCAGGTAGTGTCATCCGGGGGCTCTTAGACGGGGCGCTCCCTGGGGCGGGTGACGTACTGCCACCACAGAGGGGGGAGGTCACCGTCCTTACGGGCCGGGGGCAGGGCCTCGGTCTTGGGCCCAATGGCAGGGGTCTCTTCCTGCAGCTGCTGAACCTCTCCTGCCCAGCTCTGTTCTCGCAGCTTCTTCCACTGCTCCCTCTTGGCAAAGTAGTCAGGATACATGGCCTTCTCTGACGGATGCCAGTGATCTAGACACCATTCGGGGACCTTGTACATTTCATATCTTTCATATGAAGTTCCTCCGGGAGAGTCAGGGAATAGGTAAGGCTGGGGGTGTTGGTTAGACCAGAATTCCTCCTCCCCTGCCTTCAGCATCATAGTGGCTTTGACCATGTCCTTCTCATCCTTGGCCTCGTCGAAGCGTGCCCTCATCATACACGCGTAAAAGCGGTATTTATCCCTAAAAATACACCATGATTCAAGGTGCCTCAAGGATTTTTTGTACAGCCTCAAGACTTTTTGGTGGTGAGTAAGGTACGCAGTTGCCATTTTTTCTGTCCCCTGTCACCTTCGGCGGCGATGAGGATTGTG

Function

symbol description
ndufb9 Predicted to act upstream of or within mitochondrial electron transport, NADH to ubiquinone. Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be part of mitochondrial respiratory chain complex I. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 24. Orthologous to human NDUFB9 (NADH:ubiquinone oxidoreductase subunit B9).

NR:

description
PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1771519 True 804 TUCP 0.51 4 41165554 41169102

Neighbor

gene id symbol gene type direction distance location
LOC110496261 mtss1 coding upstream 145 41116908 ~ 41165409 (+)
trnaa-ugc-139 NA coding upstream 43872 41121608 ~ 41121682 (+)
LOC110496260 LOC106588285 coding upstream 67441 41088973 ~ 41098113 (+)
LOC110496259 LOC106588362 coding upstream 78209 41050379 ~ 41087345 (+)
LOC110496258 LOC106588364 coding upstream 134808 41027059 ~ 41030746 (+)
tatdn1 tatdn1 coding downstream 169 41169271 ~ 41172641 (+)
rnf139 rnf139 coding downstream 4459 41173561 ~ 41178610 (+)
tmem65 LOC106569922 coding downstream 14255 41183357 ~ 41205599 (+)
LOC110496268 LOC106588354 coding downstream 344054 41513156 ~ 41519992 (+)
LOC110496270 LOC106588283 coding downstream 426083 41595185 ~ 41597170 (+)
G1548060 NA non-coding upstream 277182 40887575 ~ 40888372 (+)
G1548057 NA non-coding upstream 283138 40881513 ~ 40882416 (+)
G1548056 NA non-coding upstream 284924 40880273 ~ 40880630 (+)
G1548055 NA non-coding upstream 285535 40879147 ~ 40880019 (+)
G1548054 NA non-coding upstream 287169 40878033 ~ 40878385 (+)
G1548207 NA non-coding downstream 20014 41189116 ~ 41189595 (+)
G1548863 NA non-coding downstream 36728 41205830 ~ 41206194 (+)
G1548956 NA non-coding downstream 178467 41347569 ~ 41347787 (+)
G1549127 NA non-coding downstream 253389 41422491 ~ 41422767 (+)
G1549231 NA non-coding downstream 327205 41496307 ~ 41496775 (+)
LOC110496251 LOC106569933 other upstream 427079 40736719 ~ 40738475 (+)
G1547904 NA other upstream 447810 40708018 ~ 40717744 (+)
G1547834 rps18 other upstream 693972 40469109 ~ 40471582 (+)
G1547817 NA other upstream 736034 40427108 ~ 40429520 (+)
G1547788 NA other upstream 838373 40326475 ~ 40327181 (+)
G1549270 NA other downstream 468220 41637322 ~ 41638401 (+)
LOC110496278 LOC106588345 other downstream 499177 41667929 ~ 41713715 (+)
LOC110496287 LOC106588335 other downstream 734441 41903543 ~ 41922276 (+)
LOC110496935 LOC106588280 other downstream 833717 42002708 ~ 42004496 (+)
G1549511 NA other downstream 868174 42037276 ~ 42040912 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00002590 ndufb9 coding CM030136.1 CM030136.1 21812578 ~ 21815488 (+)